DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and synj2bp

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_956211.1 Gene:synj2bp / 334599 ZFINID:ZDB-GENE-030131-6531 Length:152 Species:Danio rerio


Alignment Length:100 Identity:31/100 - (31%)
Similarity:50/100 - (50%) Gaps:3/100 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQA 98
            |.|....|..|| |.|........:||::..|..:..|.|.|||:.||:||::||:.:.|.:..|
Zfish    17 KRGPAGLGFNIV-GGVDQQYMMNDSGIYVAKIKENGAAALDGRLQEGDKILAINGRKLDNLSHGA 80

  Fly    99 VIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNG 133
            .::|.:.|...:.|.||  .:...|...:..|::|
Zfish    81 AVELFRSAGEDVHLCIQ--QRPVLQNGPTSSRADG 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 26/80 (33%)
PDZ_signaling 259..340 CDD:238492
PDZ_signaling 377..457 CDD:238492
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
synj2bpNP_956211.1 PDZ_signaling 17..97 CDD:238492 26/80 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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