DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Stxbp4

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001402024.1 Gene:Stxbp4 / 303443 RGDID:1307903 Length:557 Species:Rattus norvegicus


Alignment Length:90 Identity:23/90 - (25%)
Similarity:49/90 - (54%) Gaps:1/90 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 TASDETKFIFDQFPKARTVQVRKEGFLGIMVIYGKHAEVGSGIFISDLREGSNAELAG-VKVGDM 424
            |:|..:....::.|..|.:.|.||..||:.::.|.....|..::|.::..|.:....| :|.||.
  Rat     5 TSSARSSSPLERDPAFRVITVAKETGLGLKILGGIDRNEGPLVYIHEVTPGGDCYKDGRLKPGDQ 69

  Fly   425 LLAVNQDVTLESNYDDATGLLKRAE 449
            |:::|::..:..::::|..:|.||:
  Rat    70 LVSINKESMIGVSFEEAKNILTRAK 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160
PDZ3_INAD-like 379..454 CDD:467277 19/72 (26%)
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
Stxbp4NP_001402024.1 PDZ1_hSTXBP4-PDZ2_GgSTXBP4-like 19..107 CDD:467184 20/76 (26%)
Smc <299..>443 CDD:440809
WW 502..531 CDD:459800
Blue background indicates that the domain is not in the aligned region.

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