DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Frmpd2

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001423165.1 Gene:Frmpd2 / 268729 MGIID:2685472 Length:1383 Species:Mus musculus


Alignment Length:764 Identity:174/764 - (22%)
Similarity:267/764 - (34%) Gaps:243/764 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PE---LIHMVTLDK---TGKKSFGIC---IVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKV 79
            ||   |:|.|:.:|   .||.:.|:|   |:..||:.|....|:         ..|....|.:..
Mouse   531 PEYGVLVHRVSPEKKRPEGKMALGVCTKGIIVYEVRGSRRIATS---------QFPWRETGMIST 586

  Fly    80 GDRIL----SLNGKD---VRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQA 137
            ..:.|    |..||.   |.||::.....|                              |...:
Mouse   587 HRKKLTITSSTTGKKYTFVTNSSKTCKYLL------------------------------GLCSS 621

  Fly   138 KNKFNQEQTTNNNASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDD--- 199
            ::.|| .||.:.:.|   ....||.:...:|.::.....|....|:.    ||.|  ..|::   
Mouse   622 QHWFN-AQTGSKHPS---HRFTGQDKFAQIASLSSAHQTQANPITWI----QKLS--CSENELCV 676

  Fly   200 EDTRDMTGRIRTEAGYEIDRASAGNCKLNKQE-KDRDKEQEDEFGYTMAKINKRYNMMKDLRRIE 263
            ...:|.||            ...|....|||. |:..||:.....||..         :.|..|.
Mouse   677 PRLQDATG------------GQLGTSMENKQGFKEPGKERIGSSPYTGG---------EQLHSIG 720

  Fly   264 V-QRDASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIKPGDEIVEVNGNVLKNRCHLNASA 327
            : |:.|....|  .|||.       ..||                      .|.|..|..:   .
Mouse   721 LNQKPAQTVFG--TAGHS-------MCAG----------------------SNCLGRRTQI---C 751

  Fly   328 VFKNVDGDKLVMITSRRK-----PNDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVRKEGFL 387
            .|.:|.|.:    .|:||     ||.:.:||. :|:.|.                      .|| 
Mouse   752 CFDSVSGSQ----NSKRKGLFGEPNQDIVCVM-LKRDPV----------------------HGF- 788

  Fly   388 GIMVIYGKHAE-VGSGIFISDLREGSNAELA-GVKVGDMLLAVNQDVTLE------------SNY 438
            |.::..|:.|| ..||||||.|..|..||.| .:|.|..:||:|. ::||            ::.
Mouse   789 GFVINEGEDAEQTRSGIFISSLIPGGPAERAKKIKPGGKILALNH-ISLEGFTFSMAVRMIQNSP 852

  Fly   439 DDATGLLKRAEGVVTMILLTLKSEE-----------------AIKAEKAAEEKKKEEAKKEEEKP 486
            ||...::.:.:||..    |:.|||                 ..:..::.....::.:.:..|..
Mouse   853 DDMELIISQPKGVCG----TIHSEEKNSTASSGMFCTDILSNRCQGRQSPHIHDQDRSVRGTEMA 913

  Fly   487 Q-----EPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCV-ITHVYPEGQVAADKRLK 545
            |     .|:..:....:...:||..|...:|..|.||.|..|..|.: :..:.|.|..|.:.::.
Mouse   914 QGAGSCPPSPLQTNTGEIYFVELVKEDGTLGFSVTGGINTSVPHGGIYVKSIIPGGPAAKEGQIL 978

  Fly   546 IFDHICDINGTPI----HVGSMTTLK-VHQLFHTTYEK---------------------AVTLTV 584
            ..|.:..::|..:    |..::..|| ..|:.....|:                     ||:|..
Mouse   979 QGDRLLQVDGVSLCGLTHKQAVQCLKGPGQVARLVLERRGPRAAPQCPSADDRMGDVHMAVSLVT 1043

  Fly   585 FRADPP-------ELEKFNVDLMKKAGKELGLSLSPNEIG-C--TIADLIQ------GQYPEIDS 633
            .|...|       :..||.|.| ||..:.||.|....|.| |  |.:||::      ||..|...
Mouse  1044 ARPGRPASSVSVTDGPKFEVKL-KKNSRGLGFSFVQMERGNCIHTKSDLVRIKRLFPGQPAEEHG 1107

  Fly   634 KLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKPTLRTE 682
            .:..||||...||..:|||.||....|.:||..:|::.:.||.|.:..|
Mouse  1108 AIAAGDIILAVNGKPIEGLAFQEVLHLLRGAPEEVTLLLCRPPPGILPE 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 21/98 (21%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 16/83 (19%)
PDZ3_INAD-like 379..454 CDD:467277 28/88 (32%)
PDZ4_INAD-like 501..585 CDD:467278 23/110 (21%)
PDZ5_INAD-like 596..674 CDD:467279 31/86 (36%)
Frmpd2NP_001423165.1 Protein Kinases, catalytic domain 6..188 CDD:473864
Ubl1_cv_Nsp3_N-like 329..422 CDD:475130
B41 334..538 CDD:214604 3/6 (50%)
PH-like 534..635 CDD:473070 28/140 (20%)
PDZ_canonical 774..865 CDD:483948 30/115 (26%)
PDZ2-PTPN13_FRMPD2-like 930..1016 CDD:467254 19/85 (22%)
PDZ3_PTPN13_FRMPD2-like 1061..1149 CDD:467181 32/88 (36%)
Blue background indicates that the domain is not in the aligned region.

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