DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and X11L

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster


Alignment Length:682 Identity:136/682 - (19%)
Similarity:224/682 - (32%) Gaps:203/682 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RLKVGDRILSLN--------GKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSN 132
            :||..|.:|..:        .|....||.|..     .||.:.:.:::| |:...||...:    
  Fly   604 KLKFCDEVLPTDPDSPVWVPRKGTTISTAQGA-----AADEEPDTDLET-DRLLGQQRHDE---- 658

  Fly   133 GYMQAKNKFNQEQTTNNNASGGQGMGQGQGQGQGMAGMNRQQSM--QKRNTTFTASMRQKHSNYA 195
                 ::.|..:...:|||:.|..:. ..|...|.:..|....|  .|..|..||::||......
  Fly   659 -----QDFFADQSLADNNANEGTDIA-SNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSL 717

  Fly   196 DEDDEDTRDMTG----RIRTEAGYEIDRASAGNCK-------LNKQEKDRDKEQEDEFGYTMAKI 249
            ..:..|...:.|    .|.:....:..::..|:.|       .:|:.|.|:||     |....|:
  Fly   718 TPNSPDICQIVGTTDISISSPEKLQFTKSPTGSIKSLKDSANSDKKAKSRNKE-----GLLEPKV 777

  Fly   250 -------NKRY----------NMMKDLRRIEVQRDASKPLGLALAGHKDRQKMACFVAGVDPNGA 297
                   ..||          ...|..|.::.:...|:...||..|......             
  Fly   778 LIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPEGESQPST------------- 829

  Fly   298 LGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVD--GDKLVMITSRR-KPND--EGMCVKPIK 357
              .||:....|.:.|....||.....:|......:.  ||.:|::..|| .||.  :.....|:.
  Fly   830 --EVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLG 892

  Fly   358 KFPT----------------------------ASDETKFIFDQFPKARTVQVRKEGFLGIMVIYG 394
            ..||                            .|||.:||.....:|  .||....||       
  Fly   893 DVPTPGIGEEESPPKEPLSKHNRTPKMICHVFESDEAQFIAQSIGQA--FQVAYMEFL------- 948

  Fly   395 KHAEVGSGIFISDLREGSNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTL 459
                                :..|::        |:.:..|.:|.:                 .|
  Fly   949 --------------------KANGIE--------NESLAKEMDYQE-----------------VL 968

  Fly   460 KSEEAIKAEKAAEEKKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVT 524
            .|:|....|  .|...|:|.:||...|:  |..||                :||::.......:.
  Fly   969 NSQEIFGDE--LEIFAKKELQKEVVVPK--AKGEI----------------LGVVIVESGWGSML 1013

  Fly   525 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADP 589
            ...||.::...|..|...:|.|.|.:..|||..: ||...:.....:.:...:.||..||... |
  Fly  1014 PTVVIANLMSSGAAARCGQLNIGDQLIAINGMSL-VGLPLSTCQSYIRNAKNQTAVKFTVVPC-P 1076

  Fly   590 PELEKFNVDLMK-KAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDI-----ITKFNGDA 648
            |.:|   |.::: ||..:||.|:. |.:.|:   |::|...|      ||.:     |.:.|..:
  Fly  1077 PVVE---VKILRPKALFQLGFSVQ-NGVICS---LLRGGIAE------RGGVRVGHRIIEINNQS 1128

  Fly   649 LEGLPFQVCYALFKGANGKVSMEVTRPKPTLR 680
            :..:|......|...:.|::.|: |.|....|
  Fly  1129 VVAVPHDTIVKLLSSSVGEILMK-TMPTSMFR 1159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 10/46 (22%)
PDZ_signaling 259..340 CDD:238492 15/82 (18%)
PDZ_signaling 377..457 CDD:238492 8/79 (10%)
PDZ_signaling 500..584 CDD:238492 16/83 (19%)
PDZ_signaling 597..672 CDD:238492 19/80 (24%)
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 37/222 (17%)
PDZ_signaling 988..1065 CDD:238492 20/95 (21%)
PDZ_signaling 1092..1151 CDD:238492 15/68 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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