DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Grip2

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_006506166.1 Gene:Grip2 / 243547 MGIID:2681173 Length:1049 Species:Mus musculus


Alignment Length:820 Identity:157/820 - (19%)
Similarity:271/820 - (33%) Gaps:284/820 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISFGMHNPFPE----LIHM---VTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAH 72
            :.:.:..|.||    :|..   |:|.|.| .|||. ::||...:..: |:..:.:..:.|..||.
Mouse   139 VEYELPPPAPENNPRIISKTVDVSLYKEG-NSFGF-VLRGGAHEDLH-KSRPLVLTYVRPGGPAD 200

  Fly    73 LCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK----EADFKIELEIQTFDKSDEQQAKSDPRSNG 133
            ..|.||||||:||::|..:..::....|..::    ||.|::|.::.|.|               
Mouse   201 REGSLKVGDRLLSIDGIPLHGASHATAIATLQQCSHEALFQVEYDVATPD--------------- 250

  Fly   134 YMQAKNKFNQEQTTNNNASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADED 198
                         |..||||...:...:..|..: |::......:.....|.. |.|.::..|. 
Mouse   251 -------------TVANASGPLVVEIAKTPGSAL-GISLTTGSHRNKPAITID-RIKPASVVDR- 299

  Fly   199 DEDTRDMTGRIRTEAG---YEIDRASAGNCKLNKQEKDRDKEQEDEFGYTMAKINKRYNM----- 255
                   :|.:  .||   ..||..|..:|.|.:..|            .:|.:.::..:     
Mouse   300 -------SGAL--HAGDHILAIDGTSTEHCSLVEATK------------LLASVTEKVRLEILPS 343

  Fly   256 ------MKDLRRIEVQR-------DASKP-----------LGLALAGHKDRQK------------ 284
                  :|....:.:||       |.|.|           .....||..|:.:            
Mouse   344 PQSRRPLKPPEAVRIQRSEQLHRWDPSAPSCHSPRPSHCRAPTWAAGGPDQSRSVSSTPFSSPTM 408

  Fly   285 ---MACFVAGVDPNG----------------------ALGSVDIKPGDEIV-------------- 310
               ..|..|...|.|                      :|.|..:.||.:||              
Mouse   409 NPAFPCANASTLPRGPMSPRTTAGRRRQRRKEHRSSLSLASSTVGPGGQIVHTETTEVVLCGDPL 473

  Fly   311 -----EVNGNVLKNRCHLNASAVFKNVD-------------GDKLVMITSRRKPNDEGMCVKPIK 357
                 ::.|.:..... |::..:.:.::             ||:::.|..  ...::|...:..:
Mouse   474 SGFGLQLQGGIFATET-LSSPPLVRFIEPDSPAERCGLLQVGDRVLAING--IATEDGTMEEANQ 535

  Fly   358 KFPTASDETKFI----FD--------------QFPKARTVQVRKEGFLGIMVIYGKHAEVGSGIF 404
            ....|:...|.:    ||              :.||.|.|:      ||| .|.....:.|..:.
Mouse   536 LLRDAALARKVVLEIEFDVAESVIPSSGTFHVKLPKRRGVE------LGI-TISSASRKRGEPLI 593

  Fly   405 ISDLREGSNAELAG-VKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTLKSEEAIKAE 468
            |||:::||.|...| ::.||.|||::.........:||..:|::.|.:|.:.:            
Mouse   594 ISDIKKGSVAHRTGTLEPGDKLLAIDNIRLDHCPMEDAVQILRQCEDLVKLKI------------ 646

  Fly   469 KAAEEKKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVY 533
                  :|:|...:|   ||.:.|     ....:|||....|:|:.:.|  ........:|:.:.
Mouse   647 ------RKDEDNSDE---QESSGA-----VSYTVELKRYGGPLGITISG--TEEPFDPIIISGLT 695

  Fly   534 PEGQVAADKRLKIFDHICDIN-----GTP----IHV----GSMTTLKVHQLFHTTYEKAVTLTVF 585
            ..|.......:.:.|.|..||     |.|    ||:    |...|||:.:..........:.::.
Mouse   696 KRGLAERTGAIHVGDRILAINSVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRQSGSLS 760

  Fly   586 RA-----DPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFN 645
            .|     ||||..|         |..|....||             ..|.:||.::      .:.
Mouse   761 EASDVDEDPPEALK---------GGLLATRFSP-------------AVPSVDSAVE------SWG 797

  Fly   646 GDALEGLPFQVCYALFKGANGKVSMEVTRPKPTLRTEAPK 685
            ..|.:|           |..|..|.   .|:..:|:..|:
Mouse   798 SSATDG-----------GFGGTGSY---TPQVAVRSVTPQ 823

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 29/94 (31%)
PDZ_signaling 259..340 CDD:238492 22/167 (13%)
PDZ_signaling 377..457 CDD:238492 24/80 (30%)
PDZ_signaling 500..584 CDD:238492 20/96 (21%)
PDZ_signaling 597..672 CDD:238492 12/74 (16%)