DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and C52A11.3

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_496315.2 Gene:C52A11.3 / 183712 WormBaseID:WBGene00008257 Length:131 Species:Caenorhabditis elegans


Alignment Length:86 Identity:25/86 - (29%)
Similarity:46/86 - (53%) Gaps:13/86 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRN 93
            :|.|.|...:..|:.:         ..:..||.|..:||.|.|  ..:||||||||::||:.:.:
 Worm    51 LVKLQKDANRKIGMGV---------GVRDRGILITTVVPGSVA--AEKLKVGDRILAVNGRPILD 104

  Fly    94 STEQAVIDLIKEADFKIELEI 114
              :::|:..:|.:..::.|:|
 Worm   105 --QRSVVKSVKASGQRLYLQI 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 25/86 (29%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160
PDZ3_INAD-like 379..454 CDD:467277
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
C52A11.3NP_496315.2 PDZ_canonical 47..125 CDD:483948 25/86 (29%)
Blue background indicates that the domain is not in the aligned region.

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