DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and mics-1

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001343863.1 Gene:mics-1 / 179475 WormBaseID:WBGene00011890 Length:293 Species:Caenorhabditis elegans


Alignment Length:143 Identity:30/143 - (20%)
Similarity:62/143 - (43%) Gaps:32/143 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ELIHMVTLDKTGKKSFGICIVRGEVKDSPN-TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNG 88
            |.:.:|.::|| .|.||..||.|  .|:|: ....||::..:..:|.::  |.::.||:|||.:|
 Worm    69 EALTVVEIEKT-SKGFGFNIVGG--TDNPHFVGDIGIYVSSVNSESKSY--GVVRTGDKILSFDG 128

  Fly    89 KDVRNSTEQAVIDLIKEADF-------------------------KIELEIQTFDKSDEQQAKSD 128
            .|:...|....:::.:....                         .:.:..|...::...|..:|
 Worm   129 IDMTYKTHDEAVEVFRSVKIGHVAKMLIDREYLHLQEDRTQTPTASVSITPQVTPQTRSTQNNTD 193

  Fly   129 -PRSNGYMQAKNK 140
             |:|..:.::|::
 Worm   194 TPKSMSHSESKSR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 23/113 (20%)
PDZ_signaling 259..340 CDD:238492
PDZ_signaling 377..457 CDD:238492
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
mics-1NP_001343863.1 PDZ_signaling 71..145 CDD:238492 23/78 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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