DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and frm-5.2

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001360605.1 Gene:frm-5.2 / 176821 WormBaseID:WBGene00021406 Length:1386 Species:Caenorhabditis elegans


Alignment Length:489 Identity:95/489 - (19%)
Similarity:186/489 - (38%) Gaps:109/489 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNS 94
            :.|.|......|:.:|.|.:...|     |:::| :|.|:.|.:...:.|||||:.:..:.:...
 Worm   950 ILLVKDPANGLGLTLVDGNLNGVP-----GVYVK-LVADNGAGMKAGVCVGDRIVQVGTESMEGH 1008

  Fly    95 TEQAVIDLIKEADFKIELEIQTF--------DKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNA 151
            .....::|::....::.:.|...        |.|.|..|.:..:.:....:.:..|....||   
 Worm  1009 DRLHAVELVRRCGQRVPMVIARLDGLIRHQKDVSAEMLASAGRKKSFTSSSGDLLNAPNRTN--- 1070

  Fly   152 SGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTA--------------SMRQKHSNYADEDDEDT 202
                  ||.:.........||:   |:..:.|.|              :::.....:.||.||:.
 Worm  1071 ------GQSRTPPAPRKAANRR---QRAVSDFGAIGDALPTLDGDNLINIKAISGLHLDESDEEK 1126

  Fly   203 RDMTGRIRTEAGYEIDR----------------------------ASAGNCKLNKQEKDRDKEQE 239
            .:.  |:.|.:.|..||                            |...|.::.::.::...|..
 Worm  1127 GEY--RLPTTSMYAFDRDDDLQASIKESKKPAPEPKSGELRKYRYARRSNLEIAEEIEEEAVESS 1189

  Fly   240 DEFGYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIK 304
            |:.|        :.:..|.:..:|:.|:.:..||:.:|....|   .| :..:....|:...||:
 Worm  1190 DDDG--------QIDEGKRVIDVELDRNENGSLGVQIASLSGR---VC-IKQLTSEPAISHPDIR 1242

  Fly   305 PGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKP--NDEGMCVKPIKKFPTASDETK 367
            .||.::.|||..::.:.|....|:.:. .||::|:...|..|  :|:..........|..|    
 Worm  1243 VGDVLLYVNGIAVEGKVHQEVVAMLRG-GGDRVVLGVQRPPPAYSDQHHASSTSASAPLIS---- 1302

  Fly   368 FIFDQFPKARTVQVRKEGFLGIMVIYGKHAEVGSGIFISDLREGSNAELAG-VKVGDMLLAVNQD 431
                       |.:.|:....:.:...|.. :..||||.::.:.|.|...| ::|||.|::::.:
 Worm  1303 -----------VMLLKKPMATLGLSLAKRT-MSDGIFIRNIAQDSAASSEGTLRVGDRLVSLDGE 1355

  Fly   432 VTLESNYDDATGL--LKRAEGVVTMILLTLKSEE 463
            ..  ..:..||.|  ||..:|.|.   :|:..|:
 Worm  1356 PV--DGFTPATILEKLKLVQGPVQ---ITVTREQ 1384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 17/84 (20%)
PDZ_signaling 259..340 CDD:238492 20/80 (25%)
PDZ_signaling 377..457 CDD:238492 21/82 (26%)
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
frm-5.2NP_001360605.1 B41 510..712 CDD:214604
PH-like 708..837 CDD:388408
PDZ_signaling 948..1029 CDD:238492 17/84 (20%)
PDZ_signaling 1201..1279 CDD:238492 20/82 (24%)
PDZ_signaling 1300..1380 CDD:238492 22/100 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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