DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and frm-5.2

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001360605.1 Gene:frm-5.2 / 176821 WormBaseID:WBGene00021406 Length:1386 Species:Caenorhabditis elegans


Alignment Length:489 Identity:95/489 - (19%)
Similarity:186/489 - (38%) Gaps:109/489 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNS 94
            :.|.|......|:.:|.|.:...|     |:::| :|.|:.|.:...:.|||||:.:..:.:...
 Worm   950 ILLVKDPANGLGLTLVDGNLNGVP-----GVYVK-LVADNGAGMKAGVCVGDRIVQVGTESMEGH 1008

  Fly    95 TEQAVIDLIKEADFKIELEIQTF--------DKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNA 151
            .....::|::....::.:.|...        |.|.|..|.:..:.:....:.:..|....||   
 Worm  1009 DRLHAVELVRRCGQRVPMVIARLDGLIRHQKDVSAEMLASAGRKKSFTSSSGDLLNAPNRTN--- 1070

  Fly   152 SGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTA--------------SMRQKHSNYADEDDEDT 202
                  ||.:.........||:   |:..:.|.|              :::.....:.||.||:.
 Worm  1071 ------GQSRTPPAPRKAANRR---QRAVSDFGAIGDALPTLDGDNLINIKAISGLHLDESDEEK 1126

  Fly   203 RDMTGRIRTEAGYEIDR----------------------------ASAGNCKLNKQEKDRDKEQE 239
            .:.  |:.|.:.|..||                            |...|.::.::.::...|..
 Worm  1127 GEY--RLPTTSMYAFDRDDDLQASIKESKKPAPEPKSGELRKYRYARRSNLEIAEEIEEEAVESS 1189

  Fly   240 DEFGYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIK 304
            |:.|        :.:..|.:..:|:.|:.:..||:.:|....|   .| :..:....|:...||:
 Worm  1190 DDDG--------QIDEGKRVIDVELDRNENGSLGVQIASLSGR---VC-IKQLTSEPAISHPDIR 1242

  Fly   305 PGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKP--NDEGMCVKPIKKFPTASDETK 367
            .||.::.|||..::.:.|....|:.:. .||::|:...|..|  :|:..........|..|    
 Worm  1243 VGDVLLYVNGIAVEGKVHQEVVAMLRG-GGDRVVLGVQRPPPAYSDQHHASSTSASAPLIS---- 1302

  Fly   368 FIFDQFPKARTVQVRKEGFLGIMVIYGKHAEVGSGIFISDLREGSNAELAG-VKVGDMLLAVNQD 431
                       |.:.|:....:.:...|.. :..||||.::.:.|.|...| ::|||.|::::.:
 Worm  1303 -----------VMLLKKPMATLGLSLAKRT-MSDGIFIRNIAQDSAASSEGTLRVGDRLVSLDGE 1355

  Fly   432 VTLESNYDDATGL--LKRAEGVVTMILLTLKSEE 463
            ..  ..:..||.|  ||..:|.|.   :|:..|:
 Worm  1356 PV--DGFTPATILEKLKLVQGPVQ---ITVTREQ 1384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 17/84 (20%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 20/82 (24%)
PDZ3_INAD-like 379..454 CDD:467277 21/77 (27%)
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
frm-5.2NP_001360605.1 B41 510..712 CDD:214604
PH-like 708..837 CDD:473070
PDZ_canonical 949..1029 CDD:467153 17/84 (20%)
PDZ 1200..1282 CDD:214570 21/86 (24%)
PDZ_canonical 1305..1381 CDD:467153 21/81 (26%)
Blue background indicates that the domain is not in the aligned region.

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