DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and mpz-1

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001364655.1 Gene:mpz-1 / 174657 WormBaseID:WBGene00003404 Length:2422 Species:Caenorhabditis elegans


Alignment Length:785 Identity:183/785 - (23%)
Similarity:308/785 - (39%) Gaps:222/785 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VTLDKTGKKSFGICIVRGEVKDS-----PNTKTT--GIFIKGIVPDSPAHLCGRLKVGDRILSLN 87
            |||.:...|||||.||.|.|:.|     |.|..|  |||||.::|:|||...|::.:|||::|:|
 Worm  1477 VTLVREPNKSFGISIVGGRVEVSQKGGLPGTGNTVCGIFIKSVLPNSPAGRSGQMNMGDRVISVN 1541

  Fly    88 GKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSN-GYMQAKNKFNQEQ------ 145
            ..|:|::|.:..::.||.|...:...:|:...:.:....|...|. |.::.:|...:|:      
 Worm  1542 DVDLRDATHEQAVNAIKNASNPVRFVLQSLHTNQQNMINSASNSTVGSVRFENAKPEEELPPTAL 1606

  Fly   146 --------TTNNNASGGQGMG------------QGQGQGQGMAGMNRQQSMQKRNTTFTASM--- 187
                    :::.:::....|.            ..:.:.:.....:....:|:.||....||   
 Worm  1607 VTPLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSMDVE 1671

  Fly   188 ---------------RQK--------HSNYADEDDEDTRDMTGRIRTEAGYEID-RASAGNCKLN 228
                           ::|        .||.:.::..|.:::..:...|....:: :.|..:.|.:
 Worm  1672 REQPEANPVEETSIVKEKTPPRKISAKSNSSQKESNDRKEIKKQKSVEREMSVESKKSVRSIKKH 1736

  Fly   229 KQEK------------------------------------------------------------D 233
            :||.                                                            .
 Worm  1737 RQESTIIKKSPSNETAPLIVSDVSSSETHEDEPQAMSPSTSFDTRDADAMRALGIDDDSAAFQIK 1801

  Fly   234 RDKEQEDEFGYTMAKINKRYNM-MKDLRRIEVQR-DASKPLGLALAGHKDRQKMACFVAGVDPNG 296
            .|.|:..:|.||..||.::|:. ..:|..:..:| |..  ||::|||:|||.|...||..|.|:.
 Worm  1802 NDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGG--LGISLAGNKDRDKQNVFVVNVRPSC 1864

  Fly   297 ALGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKPNDEGMCVKPIKKFPT 361
            .|.   |:||||::|:||.:|....|:.||||.:.                    |.        
 Worm  1865 PLA---IRPGDELLEINGRLLNKISHVAASAVVRE--------------------CC-------- 1898

  Fly   362 ASDETKFIFDQFPKARTVQVRKEGFLGIMVIYGKHAEVGSGIFISDLREGSNAELAGVKVGDMLL 426
                     ||......|..|:.|.|....:.            ||....|.: |.........|
 Worm  1899 ---------DQHQNIEIVLRRRNGALNECAVR------------SDTITSSQS-LPSPPTSPSTL 1941

  Fly   427 AVNQDVTLESNYDDATGLLKRAEGVVTMILLTLKSEEAIKAEKAAEEKKKEEAKKEEEKPQEPAT 491
            |.::..:........|      ||:                |.||  ..:||..:::...|| .|
 Worm  1942 APSESKSTAPQMPTTT------EGI----------------ENAA--PNQEELSRKKSFSQE-RT 1981

  Fly   492 AEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITH-VYPEGQVAADKRLKIFDHICDING 555
            ..|:..::.:||:..:.|.:|:.:.||.:  ...|.|:.| ||.:|..|.|.|||..|.:.::||
 Worm  1982 QAIENGRETMIEIDKDGKGLGLSIVGGAD--TVLGTVVIHEVYSDGAAAHDGRLKPGDQVLEVNG 2044

  Fly   556 TPI----HVGSMTTL-----KVHQLFHTTYEKAVTLTVFRADPPELEK-FNVDLMKKAGKELGLS 610
            |.:    |..|:..|     ||..|.:    :.|.|.:...||.::.. |.:||:||.|:.||:|
 Worm  2045 TSLRGVTHDQSIAYLRRTPPKVRLLIY----RDVNLQLSLLDPTQIYNIFEIDLVKKTGRGLGIS 2105

  Fly   611 L--SPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 673
            :  ..||.|..::::::|...|.|.:|..||.|.:.||..:.|...:...|:.|...|||.:::.
 Worm  2106 IVGRKNEPGVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITGKVHLKLG 2170

  Fly   674 RPKPT 678
            |.|.|
 Worm  2171 RWKIT 2175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 37/91 (41%)
PDZ_signaling 259..340 CDD:238492 31/81 (38%)
PDZ_signaling 377..457 CDD:238492 13/79 (16%)
PDZ_signaling 500..584 CDD:238492 29/93 (31%)
PDZ_signaling 597..672 CDD:238492 26/76 (34%)
mpz-1NP_001364655.1 PDZ_signaling <271..326 CDD:238492
PDZ_signaling 539..624 CDD:238492
PDZ_signaling 685..766 CDD:238492
PDZ_signaling 843..926 CDD:238492
PDZ 1050..1124 CDD:214570
PDZ_signaling 1475..1569 CDD:238492 37/91 (41%)
PDZ 1827..1912 CDD:214570 36/126 (29%)
PDZ 1988..2073 CDD:214570 27/90 (30%)
PDZ_signaling 2089..2169 CDD:238492 27/79 (34%)
PDZ_signaling 2341..2414 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I6580
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1419918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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