DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and gras-1

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_492164.1 Gene:gras-1 / 172549 WormBaseID:WBGene00009272 Length:245 Species:Caenorhabditis elegans


Alignment Length:201 Identity:39/201 - (19%)
Similarity:76/201 - (37%) Gaps:45/201 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KTGKKSFGICIVRGEVK-DSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQ 97
            :|.:.|||..:.....| .|.|:.....::..:..||||..|| :..||.::::|.|.|..::..
 Worm    63 QTFETSFGFALQSYVFKRTSSNSYERITYVDYVSADSPADRCG-ITRGDMVIAVNEKSVVTASHA 126

  Fly    98 AVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNASGGQGMGQGQG 162
            .:::.|.:.   :::.:....|...:..:...||   :|.:...:                    
 Worm   127 EIVESIAQC---LQVSLVLVFKDVARIVELSMRS---IQLRFMLD-------------------- 165

  Fly   163 QGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAGNCKL 227
                 |.:...:.::|......|....:|.|  :|:||......        ||:|. ...|.: 
 Worm   166 -----AKIRELRMLEKTEEDLQALYDDEHGN--EEEDESLESTL--------YELDE-ELKNVQ- 213

  Fly   228 NKQEKD 233
            |.|||:
 Worm   214 NPQEKE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 19/81 (23%)
PDZ_signaling 259..340 CDD:238492
PDZ_signaling 377..457 CDD:238492
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
gras-1NP_492164.1 PDZ 67..145 CDD:238080 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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