DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Grid2ip

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:69 Identity:27/69 - (39%)
Similarity:39/69 - (56%) Gaps:11/69 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVI 100
            |.||||..: ||.   .|      ::|:.::|.|||.... ||.|||||.|||.|:||.:...|:
Mouse   274 GNKSFGFTL-RGH---GP------VWIESVLPGSPAENAS-LKSGDRILFLNGLDMRNCSHDKVV 327

  Fly   101 DLIK 104
            .:::
Mouse   328 SMLQ 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 27/69 (39%)
PDZ_signaling 259..340 CDD:238492
PDZ_signaling 377..457 CDD:238492
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
Grid2ipNP_001152793.1 PDZ_signaling 9..69 CDD:238492
HN_L-delphilin-R1_like 122..201 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270
PDZ_signaling 269..342 CDD:238492 27/69 (39%)
HN_L-delphilin-R2_like 378..457 CDD:259821
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821
FH2 812..1180 CDD:280362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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