DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and Lnx1

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001153049.1 Gene:Lnx1 / 16924 MGIID:1278335 Length:728 Species:Mus musculus


Alignment Length:498 Identity:112/498 - (22%)
Similarity:184/498 - (36%) Gaps:105/498 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FPELIHM-----VTLDKTGK----KSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLK 78
            ||.|.|:     :|..|..:    :|..|.:|.|.     .|....|.|:.|..|......|||.
Mouse   264 FPRLFHLIPDGEITSIKINRADPSESLSIRLVGGS-----ETPLVHIIIQHIYRDGVIARDGRLL 323

  Fly    79 VGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKS----------DPRSNG 133
            .||.||.:||.|:.|......:.|:::....:.|.:..     ||:.:|          .||.:.
Mouse   324 PGDIILKVNGMDISNVPHNYAVRLLRQPCQVLRLTVLR-----EQKFRSRSNAHVPDSYGPRDDS 383

  Fly   134 YMQAKNKFNQEQTTN---------------NNASGGQGMGQGQ-GQGQGMAGMN----RQQSMQK 178
            :....||.:.|:...               |..:||.....|| .:...:..:|    |..|.:.
Mouse   384 FHVILNKSSPEEQLGIKLVRRVDEPGVFIFNVLNGGVADRHGQLEENDRVLAINGHDLRFGSPES 448

  Fly   179 RNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGY-EIDRASAGNCKLNKQEKDRDKEQEDEF 242
            ......||.|:.|...:.:..:.:.|    |..|||: ...:.|.|..:.|...|......|   
Mouse   449 AAHLIQASERRVHLVVSRQVRQSSPD----IFQEAGWISNGQQSPGPGERNTASKPAATCHE--- 506

  Fly   243 GYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGHKDRQK--MACFVAGVDPNGALGSVD--I 303
                             :.:.|.:|.|:.||:.:.|....::  :..:|..|:|.|.: |.|  |
Mouse   507 -----------------KVVSVWKDPSESLGMTVGGGASHREWDLPIYVISVEPGGVI-SRDGRI 553

  Fly   304 KPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKPNDEGMCVKPIKKFPTASDETKF 368
            |.||.::.|||..|.......|.|:.|:.....::.....::...:..|      .|.|.|....
Mouse   554 KTGDILLNVNGIELTEVSRTEAVAILKSAPSSVVLKALEVKEQEAQEDC------SPAALDSNHN 612

  Fly   369 IF---DQFP-------------KARTVQVRKE--GFLGIMVIYGKHAEVGS-GIFISDLREGSNA 414
            :.   |..|             ..:.|.:|:.  |.||..::.|.....|: ..||..:.||:.|
Mouse   613 VTPPGDWSPSWVMWLELPQYLCNCKDVILRRNTAGSLGFCIVGGYEEYSGNKPFFIKSIVEGTPA 677

  Fly   415 ELAG-VKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMIL 456
            ...| ::.||:|||||...|....:.....:||..:|.:|:.:
Mouse   678 YNDGRIRCGDILLAVNGRSTSGMIHACLARMLKELKGRITLTI 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 24/94 (26%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 23/86 (27%)
PDZ3_INAD-like 379..454 CDD:467277 24/78 (31%)
PDZ4_INAD-like 501..585 CDD:467278
PDZ5_INAD-like 596..674 CDD:467279
Lnx1NP_001153049.1 mRING-HC-C3HC3D_LNX1 42..83 CDD:438435
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..220
NPXY motif 185..188
Interaction with MAGEB18. /evidence=ECO:0000250 186..244
PDZ1_LNX1_2-like 274..362 CDD:467165 24/97 (25%)
PDZ2_LNX1_2-like 384..466 CDD:467166 15/81 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..500 3/18 (17%)
PDZ3_LNX1_2-like 507..592 CDD:467167 23/85 (27%)
PDZ4_LNX1_2-like 637..725 CDD:467168 25/84 (30%)
Blue background indicates that the domain is not in the aligned region.

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