DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and FRMPD2

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_054220869.1 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1395 Species:Homo sapiens


Alignment Length:695 Identity:149/695 - (21%)
Similarity:235/695 - (33%) Gaps:203/695 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PFPELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSL 86
            |..|::. |||.:...:.||..|..||.....:   .||||..|:|..||.....:|.|.:||:|
Human   769 PGREIVR-VTLKRDPHRGFGFVINEGEYSGQAD---PGIFISSIIPGGPAEKAKTIKPGGQILAL 829

  Fly    87 NGKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNA 151
            |...:...|....:.:|:.:...|||.|        .|:|. ...|...:.||     .|.|:..
Human   830 NHISLEGFTFNMAVRMIQNSPDNIELII--------SQSKG-VGGNNPDEEKN-----STANSGV 880

  Fly   152 SGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTG------RIR 210
            |....:..|.   ||....:.|.  |.|||                   :..||.|      |:|
Human   881 SSTDILSFGY---QGSLLSHTQD--QDRNT-------------------EELDMAGVQSLVPRLR 921

  Fly   211 TEAGYEIDRASAGNCKLNKQEKDRDK-------EQEDEFGYTM-AKINKRYNMMKDLRRIEVQRD 267
            .:..:...:.:..:|..:..|....:       :::...|::: ..||                 
Human   922 HQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGIN----------------- 969

  Fly   268 ASKPLGLALAGHKDRQKMACFVAGVDPNG-ALGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKN 331
            .|.|.|            ..:|..:.|.| |.....|..||.:::|:|.:|....|..|....|.
Human   970 TSVPYG------------GIYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLKG 1022

  Fly   332 VDGDKLVMITSRRKP-------------NDEGMCVKPIKKFP-------TASDETKFIFDQFPKA 376
             .|....::..||.|             .||...|..:...|       :.:|..||        
Human  1023 -PGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKF-------- 1078

  Fly   377 RTVQVRKE----GFLGIMVIYGKHAEVGSGIF-ISDLREGSNAELAG-VKVGDMLLAVNQDVTLE 435
             .|:::|.    ||..:.:.....:.:.|.:. |..|..|..||..| :..||::||||...|..
Human  1079 -EVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEG 1142

  Fly   436 SNYDDATGLLKRAEGVVTMIL-------LTLKSEEAIKAEKAAEEK---------------KKEE 478
            ..:.:...||:.|...||::|       |....:|....|.:|:::               .:|:
Human  1143 LIFQEVLHLLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILDQED 1207

  Fly   479 AKKEEEKPQEPATAEIKP--NKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAAD 541
            :.::...|.......::|  ::|.:.|.:           .|:|........:|| .||..    
Human  1208 SWRDSASPDAGEGLGLRPESSQKAIREAQ-----------WGQNRERPWASSLTH-SPESH---- 1256

  Fly   542 KRLKIFDHICDINGTPIHVGSMTTLKVHQ-----LFHTTYEKAV------TLTVFRADPPEL--E 593
                  .|:|               |:||     ...|:.||.|      ...:.|...|||  |
Human  1257 ------PHLC---------------KLHQERDESTLATSLEKDVRQNCYSVCDIMRLGSPELDGE 1300

  Fly   594 KFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYP-----EIDS 633
            ....|:....|..  ...|.:|...||....|||.|     |.||
Human  1301 DGEGDMYHPCGAP--SPTSEDEEYLTINSTCQGQLPCEECLEADS 1343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 27/85 (32%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 17/83 (20%)
PDZ3_INAD-like 379..454 CDD:467277 22/80 (28%)
PDZ4_INAD-like 501..585 CDD:467278 16/94 (17%)
PDZ5_INAD-like 596..674 CDD:467279 13/43 (30%)
FRMPD2XP_054220869.1 KIND 15..197 CDD:214801
FERM_F1_FRMPD2 341..434 CDD:340716
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008
PDZ_canonical 772..863 CDD:483948 31/103 (30%)
PDZ2-PTPN13_FRMPD2-like 947..1033 CDD:467254 20/115 (17%)
PDZ3_PTPN13_FRMPD2-like 1078..1166 CDD:467181 25/96 (26%)
Blue background indicates that the domain is not in the aligned region.

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