DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and Patj

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:689 Identity:182/689 - (26%)
Similarity:283/689 - (41%) Gaps:142/689 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PELIH-----MVTLDKTGKKSFGICIVRGE-----VKDSPNTKTTGIFIKGIVPDSPAHLCGRLK 78
            |...|     :|.:.:....|.||.||.|:     :|:....|  |||||.::.||||.....||
Mouse  1064 PNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELK--GIFIKQVLEDSPAGKTNALK 1126

  Fly    79 VGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKF-- 141
            .||:||.::|.|::|::....::.||.|...:...:|:.        .|.||....:..|.|.  
Mouse  1127 TGDKILEVSGVDLQNASHAEAVEAIKSAGNPVVFVVQSL--------SSTPRVIPTVNNKGKTPA 1183

  Fly   142 -NQEQTTNNNASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDM 205
             ||:|                         |.|:...||:.|....|:......|     .:.||
Mouse  1184 PNQDQ-------------------------NTQERKAKRHGTAPPPMKLPPPYRA-----PSADM 1218

  Fly   206 TGRIRTEAGYEIDRASAGNCKLNKQEKDRDKEQEDEFGYTMAKINKRY-NMMKDLRRIEVQRDAS 269
            .|                              .|::...|..||.:|| ::..:|..||:::| .
Mouse  1219 EG------------------------------SEEDCALTDKKIRQRYADLPGELHIIELEKD-K 1252

  Fly   270 KPLGLALAGHKDRQKMACFVAGVDPNG-ALGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVD 333
            ..|||:|||:|||.:|:.||.|::|.| |.....::.|||::|:|..:|..|.|.||||:.|...
Mouse  1253 NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 1317

  Fly   334 GD-KLVMITSRRKPNDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVRKEGFLGIMVIYGKHA 397
            .. |||.|.     |::.:....:..||..|.....:.|               ||...:.....
Mouse  1318 TRVKLVFIR-----NEDAVSQMAVAPFPELSHSPSPVED---------------LGGTELVSSEE 1362

  Fly   398 EVGSGIFISDL--REGSNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTLK 460
            |  |.:....|  .|.|..|.....|.|.::|..|.   ||...|:.....:.:...|.:..:.:
Mouse  1363 E--SSVDAKHLPEPESSKPEDLSQVVDDNMVAEQQK---ESESPDSAACQIKQQTYSTQVSSSSQ 1422

  Fly   461 SEEAIKAEKAAEEKKKEEAKKEEEKP---------QEPATAEIKPNKKILIELKVEKKPMGVIVC 516
            ...:..|................:.|         .:|||..|.|.::::||:...:..:|:.:.
Mouse  1423 DSPSSPAPLCQSAHADVTGSGNFQAPLPVDPAPLSVDPATCPIVPGQEMIIEISKGRSGLGLSIV 1487

  Fly   517 GGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPI----HVGSMTTLKVHQLFHTTYE 577
            |||:..: ...||..||.||..|.|.||...|.|.::||..:    |..::|.|:      .|.:
Mouse  1488 GGKDTPL-DAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSSSHEEAITALR------QTPQ 1545

  Fly   578 KAVTLTVFR-----ADPPELEKFNVDLMKKAGKELGLSL--SPNEIGCTIADLIQGQYPEIDSKL 635
            | |.|.|:|     .|...||.|.|||.||.|:.||||:  ..:..|..|:|:::|...::|.:|
Mouse  1546 K-VRLVVYRDEAQYRDEENLEVFLVDLQKKTGRGLGLSIVGKRSGSGVFISDIVKGGAADLDGRL 1609

  Fly   636 QRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTR 674
            .|||.|...||:.:.....:....:.|...|.|.:|:.|
Mouse  1610 IRGDQILSVNGEDMRHASQETVATILKCVQGLVQLEIGR 1648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 31/97 (32%)
PDZ_signaling 259..340 CDD:238492 36/82 (44%)
PDZ_signaling 377..457 CDD:238492 16/81 (20%)
PDZ_signaling 500..584 CDD:238492 27/87 (31%)
PDZ_signaling 597..672 CDD:238492 25/76 (33%)
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 363..450 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488
PDZ_signaling 572..636 CDD:238492
PDZ 685..774 CDD:214570
PDZ_signaling 1072..1163 CDD:238492 30/92 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219 13/77 (17%)
PDZ 1242..1327 CDD:214570 37/90 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453 21/132 (16%)
MPDZ_u10 <1453..1468 CDD:374710 4/14 (29%)
PDZ 1469..1554 CDD:214570 28/92 (30%)
PDZ_signaling 1566..1646 CDD:238492 26/79 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676
PDZ_signaling 1707..1792 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10112
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1419918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

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