DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaD and SYNJ2BP-COX16

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001189476.1 Gene:SYNJ2BP-COX16 / 100529257 HGNCID:48350 Length:191 Species:Homo sapiens


Alignment Length:92 Identity:30/92 - (32%)
Similarity:50/92 - (54%) Gaps:5/92 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HMVTLDK----TGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNG 88
            ::||.::    .|....|..|| |.......:..:||::..|..:..|.|.|||:.||:|||:||
Human     7 YLVTEEEINLTRGPSGLGFNIV-GGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNG 70

  Fly    89 KDVRNSTEQAVIDLIKEADFKIELEIQ 115
            :|::|...|..:||.:.|.:.:.|.:|
Human    71 QDLKNLLHQDAVDLFRNAGYAVSLRVQ 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 29/90 (32%)
PDZ_signaling 259..340 CDD:238492
PDZ_signaling 377..457 CDD:238492
PDZ_signaling 500..584 CDD:238492
PDZ_signaling 597..672 CDD:238492
SYNJ2BP-COX16NP_001189476.1 PDZ_signaling 13..97 CDD:238492 27/84 (32%)
DegQ <16..77 CDD:223343 22/61 (36%)
COX16 <133..173 CDD:290843
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.