DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and mpdz

DIOPT Version :9

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_002940172.2 Gene:mpdz / 100488270 XenbaseID:XB-GENE-994032 Length:2164 Species:Xenopus tropicalis


Alignment Length:757 Identity:209/757 - (27%)
Similarity:338/757 - (44%) Gaps:146/757 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HNPFPELIHMVTLDKTGKKSFGICIVRGE---VKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGD 81
            :||     ..|.|.:...||.||.||.|.   .:.|......|||||.|:.||||...|.||.||
 Frog  1193 NNP-----RRVELWREPGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGKNGTLKTGD 1252

  Fly    82 RILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT-FDKSDEQQAKSDPRSNGYMQ--AKNKFNQ 143
            ||:.::|.|:|:::.:..::.|::|...:...:|: .::...:.....|.|:...|  ..|.|:.
 Frog  1253 RIVEVDGTDLRDASHEQAVEAIRKAGNPVVFLVQSIINRPRPESVYCSPSSSALRQHPTTNPFSH 1317

  Fly   144 E--------------------QTTNNNASGGQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMR 188
            .                    :.||...|....:.:|              :|......|..|..
 Frog  1318 PSPKKPALPLLQSTFGTKPLFRCTNPFDSSQLNINKG--------------TMNPVRIAFRCSPT 1368

  Fly   189 Q-------KHSNYADEDDEDTRD---MTGRIRTEAGYEIDRASAGNCKLNKQEKDRDKEQEDEFG 243
            .       |.|:.:|.:.|.|..   :||.         ...|:.|.:..:.....|.|:|||||
 Frog  1369 NPFAPTPFKASSSSDSETEKTSSSNYLTGP---------STLSSVNSEKLQMTSSTDPEKEDEFG 1424

  Fly   244 YTMAKINKRY-NMMKDLRRIEVQRDASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDIKPG- 306
            |:..||::|| |:..:|..||::: ....|||:|||:|||.:|:.|:.|:|||||.|    |.| 
 Frog  1425 YSWKKISQRYGNLPGELHMIELEK-GKTGLGLSLAGNKDRSRMSVFIVGIDPNGAAG----KDGR 1484

  Fly   307 ----DEIVEVNGNVLKNRCHLNASAVFKNVDGD-KLVMITSRRKPNDEGMCVKPIK----KFPTA 362
                ||::|:||.:|..|.|.|||::.|..... |::.|.::...|...:|  |:|    .||.:
 Frog  1485 LQIADELLEINGQILYGRSHQNASSIIKCAPSKVKIIFIRNKDAVNQMAVC--PVKATEPSFPNS 1547

  Fly   363 SDETKFIFDQ--------------FPKARTVQVRK-EGFLGIMVIYGKHAEVGSGIFISDLRE-G 411
            |..:....::              |.....|::.| :|.|||.:   ...:..:|:.|..|.: |
 Frog  1548 SAFSNLEVEEESVPSPVLPLNVGSFKNVLHVELPKDQGGLGIAI---SEEDTVNGVVIKSLTDHG 1609

  Fly   412 SNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTLKSEE----------AIK 466
            :.|:...:||||.:|||:.:..:....:....|||:|:   |.:.||:.|:|          :|.
 Frog  1610 AAAKDGRIKVGDCILAVDDEPVVGDPIEKVICLLKKAK---TTVKLTISSDEKDMPQLLPLPSIT 1671

  Fly   467 AEKAAEEKKK-------------EEAKKEEEK------PQEPATAEIKPNKKILIELKVEKKPMG 512
            ...:..|.|.             |..:.....      |.:|||..|.|..:..|::...:..:|
 Frog  1672 LTSSTGEIKNGQQCLPLSNFSEPEPVRSSSRSSTPATFPSDPATCPIIPGCETTIDISKGRTGLG 1736

  Fly   513 VIVCGGKNNHVTTGCVITH-VYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTY 576
            :.:.||.:  ...|.:|.| ||.||..:.|.||...|.|.::||  |.:.:.|..:...:...|.
 Frog  1737 LSIVGGAD--TLLGAIIIHEVYEEGAASKDGRLWAGDQILEVNG--IDLRNATHDEAINVLRQTP 1797

  Fly   577 EKAVTLTVFRADPPELEK-----FNVDLMKKAGKELGLSL--SPNEIGCTIADLIQGQYPEIDSK 634
            :| |.|||:|.:....|:     .:::|.||.||.||||:  ..|:.|..::|:::|...|||.:
 Frog  1798 QK-VRLTVYRDEAQYKEEDMYDVLDLELQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIAEIDGR 1861

  Fly   635 LQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPK 676
            |.:||.:...||:.:.....:...||.|.:.|.|.:||.|.|
 Frog  1862 LMQGDQLLMVNGEDVRNATQEAVAALLKCSLGTVKLEVGRIK 1903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 32/90 (36%)
PDZ_signaling 259..340 CDD:238492 36/86 (42%)
PDZ_signaling 377..457 CDD:238492 23/81 (28%)
PDZ_signaling 500..584 CDD:238492 24/84 (29%)
PDZ_signaling 597..672 CDD:238492 26/76 (34%)
mpdzXP_002940172.2 L27_2 6..63 CDD:312549
PDZ_signaling 139..225 CDD:238492
PDZ_signaling 259..338 CDD:238492
PDZ 380..467 CDD:214570
PDZ_signaling 560..629 CDD:238492
PDZ 726..814 CDD:214570
PDZ 1038..1108 CDD:214570
PDZ_signaling 1195..1286 CDD:238492 33/95 (35%)
PDZ 1440..1526 CDD:214570 37/90 (41%)
PDZ 1574..1657 CDD:214570 25/88 (28%)
MPDZ_u10 1662..1722 CDD:374710 10/59 (17%)
PDZ 1723..1807 CDD:214570 26/88 (30%)
PDZ_signaling 1819..1899 CDD:238492 26/79 (33%)
PDZ_signaling 1954..2039 CDD:238492
PDZ_signaling 2080..2163 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9660
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I3866
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1419918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

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