DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaD and pdzk1

DIOPT Version :10

Sequence 1:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_031752326.1 Gene:pdzk1 / 100145801 XenbaseID:XB-GENE-1013787 Length:621 Species:Xenopus tropicalis


Alignment Length:645 Identity:124/645 - (19%)
Similarity:225/645 - (34%) Gaps:233/645 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TLDKTGKKSFG--ICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRN 93
            |:.|...|.||  :.|.|.||         |..::.:.|.|.|...| ||.|||::.:|||.|.:
 Frog    11 TVTKQEGKGFGFYLRIERDEV---------GHLVRSVEPGSSAEKAG-LKDGDRVMKVNGKFVDD 65

  Fly    94 STEQAVIDLIKEADFKIELEIQTFDKSD-EQQAKSDPRSNGYMQAKNKFNQEQTTNNNASGGQGM 157
            .....|:.|||::...:.||:  .||:. |...|.:...|....||.....:......|:||:.:
 Frog    66 KEHAEVVALIKDSGTTVTLEV--LDKTAYENTKKKEDNKNSNQPAKQPEAPQPGAQPLANGGKAL 128

  Fly   158 GQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYA--------------------------- 195
                                ||.......:::.:|:|.                           
 Frog   129 --------------------KRRPRLCYLIKEGNSSYGFSLKTTKCENGIFLSALVPNGIAAKAG 173

  Fly   196 --DED----------DEDTRDMTGRIRTEAGYEI-----DRASAGNCKLNKQEKDRDKEQEDEF- 242
              |:|          ::.|.|...::..|:|.:|     |:|:                  ||: 
 Frog   174 VKDDDRIIEVNGKNVEDSTHDKLAKMLKESGGKIMFLVSDKAT------------------DEYF 220

  Fly   243 -GYTMAKINKRYN---MMKDLRRIEVQRDASKPLGLALAGHKDRQKMACFVAGVDPNGALGSVDI 303
             ..|||....:.|   :....|.:|:::|.:   |......:::.:...|:..:|.........:
 Frog   221 KSQTMAITADKANVELLPSKPRTVELKKDTN---GYGFYLRQEKNRKGHFIMEIDSGSPAEKAKL 282

  Fly   304 KPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKPND-------------------- 348
            :..|.||.|||..::.:.|.....|.:. .|||..::.:.:|.::                    
 Frog   283 QDYDRIVAVNGECVEAKDHEEVVKVIQK-GGDKTTLLIADKKTDEMYSLAGVSPYLYLQETQGEI 346

  Fly   349 ---------------------------EGMCVKPIK----KFPTASDETKFIFDQFPKARTVQVR 382
                                       :...|:|.|    ..||...:.|      |:...:|..
 Frog   347 KSSSKEEATPAPAVVPSQTPTPTVAPAQPSAVEPKKPETPAAPTGGQKHK------PRLCKLQKG 405

  Fly   383 KEGFLGIMVIYGKHAEV---GSGIFISDLREGSNAELAGVKVGDMLLAVNQDVTLE-SNYDDATG 443
            ..|       ||.|...   ..|:|::.:.:|.:|::||:|..|:|:.|| .|.:| .:|:|...
 Frog   406 NNG-------YGFHLNAIKDTPGLFMNQVLKGGSADVAGIKNDDVLVEVN-GVNMEKESYEDVLI 462

  Fly   444 LLKRAEGVVTMILLTLKS----------------------------------------------- 461
            .:|..:|::|:::.:.::                                               
 Frog   463 KIKETKGILTLLVASQEAYDYFKGQKIPITASLADPVSEVSPSSSAAAPASTASKARAAPEPAEV 527

  Fly   462 -----------EEAIKAEKAAEEKKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKP 510
                       |:.::.||..|.:|::|.:||.||.:|....:.|..:|..:|.|.|:||
 Frog   528 QSNQKPAEEPKEKDMEKEKEKELEKEKEKEKEMEKEKEKEIEKEKEKEKEKVEQKSEQKP 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaDNP_001246470.1 PDZ1_INAD-like 29..115 CDD:467276 29/85 (34%)
PDZ8_MUPP1-PDZ7_PATJ-PDZ2_INAD-like 259..342 CDD:467160 17/82 (21%)
PDZ3_INAD-like 379..454 CDD:467277 22/78 (28%)
PDZ4_INAD-like 501..585 CDD:467278 5/10 (50%)
PDZ5_INAD-like 596..674 CDD:467279
pdzk1XP_031752326.1 PDZ_NHERF-like 8..88 CDD:467249 29/88 (33%)
PDZ_NHERF-like 133..213 CDD:467249 9/79 (11%)
PDZ_NHERF-like 242..321 CDD:467249 17/82 (21%)
PDZ_NHERF-like 398..477 CDD:467249 23/86 (27%)
Blue background indicates that the domain is not in the aligned region.

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