DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL23 and emb2171

DIOPT Version :10

Sequence 1:NP_523813.1 Gene:RpL23 / 37628 FlyBaseID:FBgn0010078 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_187090.1 Gene:emb2171 / 819595 AraportID:AT3G04400 Length:140 Species:Arabidopsis thaliana


Alignment Length:139 Identity:112/139 - (80%)
Similarity:130/139 - (93%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATV 65
            |||||||||:|.|||:||||||.|.:||||||||||||:|:|.||:|||||||:|.||||.:|||
plant     1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

  Fly    66 KKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWP 130
            |||||:|||||:|||::|||||:||:||||:|||||||||||.||||||||||||:.||||||||
plant    66 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWP 130

  Fly   131 RIASNASSI 139
            ||||.|::|
plant   131 RIASAANAI 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL23NP_523813.1 PTZ00054 2..139 CDD:185418 110/136 (81%)
emb2171NP_187090.1 PTZ00054 2..140 CDD:185418 111/138 (80%)

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