DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL23 and rpl2302

DIOPT Version :10

Sequence 1:NP_523813.1 Gene:RpL23 / 37628 FlyBaseID:FBgn0010078 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_588139.1 Gene:rpl2302 / 2539286 PomBaseID:SPCC1322.11 Length:139 Species:Schizosaccharomyces pombe


Alignment Length:136 Identity:102/136 - (75%)
Similarity:122/136 - (89%) Gaps:0/136 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKG 68
            ||||..:|.|:|::|||||.|:||||||:||||||:::|.|...||||||||..|||.:||||||
pombe     3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKG 67

  Fly    69 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIA 133
            ||:||||:|||:|:||||.:||:|||::|||||||||||.|||||||||||||||||||||||||
pombe    68 KPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIA 132

  Fly   134 SNASSI 139
            |||.::
pombe   133 SNAGTV 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL23NP_523813.1 PTZ00054 2..139 CDD:185418 102/134 (76%)
rpl2302NP_588139.1 PTZ00054 1..139 CDD:185418 102/136 (75%)

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