DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL23 and rpl-23

DIOPT Version :10

Sequence 1:NP_523813.1 Gene:RpL23 / 37628 FlyBaseID:FBgn0010078 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_498231.1 Gene:rpl-23 / 175796 WormBaseID:WBGene00004435 Length:140 Species:Caenorhabditis elegans


Alignment Length:140 Identity:123/140 - (87%)
Similarity:132/140 - (94%) Gaps:0/140 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATV 65
            ||||||||.:|.|||||||||||||||||||||||||:||:|:||||||||||:||||||||.:|
 Worm     1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSV 65

  Fly    66 KKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWP 130
            |||||||||||:..|||||||.|||:||.||||||||||||||||||||||||||||||||||||
 Worm    66 KKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWP 130

  Fly   131 RIASNASSIA 140
            |||:||.|||
 Worm   131 RIAANAGSIA 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL23NP_523813.1 PTZ00054 2..139 CDD:185418 119/136 (88%)
rpl-23NP_498231.1 PTZ00054 2..139 CDD:185418 119/136 (88%)

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