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Protein Alignment RpL23 and LOC108350588
DIOPT Version :9
Sequence 1: | NP_523813.1 |
Gene: | RpL23 / 37628 |
FlyBaseID: | FBgn0010078 |
Length: | 140 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017447849.1 |
Gene: | LOC108350588 / 108350588 |
RGDID: | 11504759 |
Length: | 142 |
Species: | Rattus norvegicus |
Alignment Length: | 138 |
Identity: | 96/138 - (69%) |
Similarity: | 118/138 - (85%) |
Gaps: | 0/138 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 KRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKK 67
|:.|||::|.||||||||.||||:|.||:||.||:|:|:|..|:|||:||||||||.|.:|||:|
Rat 5 KQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQK 69
Fly 68 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRI 132
.:|:|||||.||:||||:|...|:|||.:|||::|.|||||||:|||||||||:|||.||.||||
Rat 70 SRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRI 134
Fly 133 ASNASSIA 140
||||.|.|
Rat 135 ASNAGSTA 142
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RpL23 | NP_523813.1 |
PTZ00054 |
2..139 |
CDD:185418 |
94/135 (70%) |
LOC108350588 | XP_017447849.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1374830at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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