DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13531 and spg11

DIOPT Version :10

Sequence 1:NP_611726.1 Gene:CG13531 / 37627 FlyBaseID:FBgn0034786 Length:1815 Species:Drosophila melanogaster
Sequence 2:NP_001181923.2 Gene:spg11 / 793551 ZFINID:ZDB-GENE-101017-1 Length:2379 Species:Danio rerio


Alignment Length:2043 Identity:424/2043 - (20%)
Similarity:759/2043 - (37%) Gaps:538/2043 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HSAQAQAQARDKIFKNWRGISEVTIIKEVATKGEHIDLCMEYWAQKRKIPVSE--------YRHY 58
            |:|   |..|::..: |..:|:..::.....              .|:||.::        ..|.
Zfish   628 HTA---ASGREEEHQ-WISLSDEEVVHRAVL--------------SRRIPHAQALLRRRGSAEHT 674

  Fly    59 FYDVVQA---YVQRLLSERLVCKAEDVIRNVDRDVKCFFFQFACECQDEELSEFVLDHLRSREPL 120
            ..|:.:.   :....|:.|.:.:|..::.::..:||...........|.:|..|:::.|:.::.|
Zfish   675 LQDIRRTGLKHTHTCLTLRDLQQATTLLTHMGFNVKEQLHNICVYTADRDLRAFMVEELQKQDHL 739

  Fly   121 MYEQEEPVLAYHWSLVQQL------RECEALVAKHRTQLPRVHIEAMMTLPEQALQ--------- 170
            ..::.:.|...|  .::.|      |....|.|....|:.|...::...| |:.||         
Zfish   740 SADELKQVNFIH--TIESLCSRPANRSSRRLDANRVLQVSRCDPQSRRLL-EKLLQDSDSSSTSL 801

  Fly   171 LLLVELYFAN----------------------GNESLLGSLSKDMVWQHLVDSDEQAKLQRWCRL 213
            |..:.|::.|                      |:.::|        |.:|....:..:...|  |
Zfish   802 LDPLRLHWVNHWDRDAQTHILLSRTHTHTQCSGDAAVL--------WAYLTSLHDSVRCSAW--L 856

  Fly   214 QEEGFVSQE-TLSPLEQSFTAWKIDATMYEYAVEELQQPSEVLRNF----FARAGYFFMDESEDI 273
            .......:| :.:|.....||         :.::...:..|.|||.    .||.|.|...|.:|.
Zfish   857 SSSSVCERESSAAPCWPQLTA---------HVLDTCTRCGEHLRNIILDQLARQGQFVPAEMQDF 912

  Fly   274 PSLLRRL-----------------------------CTME----------CLGKHADLLSRQPLA 299
            ..||.||                             |:.|          ||..:...|    |.
Zfish   913 QQLLWRLAQAGGVMHDGKEPSLPQAGGVMHDGKELCCSQEQEFHQRFILHCLENNLQFL----LY 973

  Fly   300 KYLLDRGQYSLLLMECVPIASLELLAGTETHQE-PLINLIVDIK--TNSLTENE-GFELISKSVQ 360
            .||   ..|.|....|      .||:.:...:. |...:::.::  |..|||.| .||....:.|
Zfish   974 TYL---EHYGLSPENC------PLLSDSSVCESFPCFQMMLKLQKITTHLTEPECVFEASLAAAQ 1029

  Fly   361 A-YLEKTHDTVDS--FEGHPLLTFYDFL----GQEPSVRSLEGFLTSTNLGRVPYLKSLIARF-- 416
            . .|..:..::.|  .|||.|||....:    |.:.:|.:::..|....|.:.|.||:  |.|  
Zfish  1030 VLLLPGSQASISSVLLEGHSLLTLATAMFTAGGIQQAVSTVDPQLLRMALRQYPQLKT--ALFPQ 1092

  Fly   417 --DHGPTSCNFGLPTAHDL----FMKFKHVNLPLLATAGHGELVCFSNARLSQRYARKSQLNYTH 475
              ..|..|....|.:.|.|    ...::..|....::....|...||::.|...:|....|::.:
Zfish  1093 SGPRGDVSLYHLLQSLHPLDSSRLFGWQSANSVSASSEASSEPPHFSSSHLVSNFAIVENLDFLY 1157

  Fly   476 YLKQQRSAYAVYYLITEQLQLYGQITKTQLFHACETVTQIALQHAGDDELVTHCVACCEMLGFDT 540
            :|:..|.|:|....:|:.|:.... ||.||..|.:....:||.:.....:.:.||..||::|..:
Zfish  1158 FLRHGRPAFAYAVYLTQHLRDCSN-TKLQLSMAVDQSYSLALLNFSSASVSSACVCFCELMGVCS 1221

  Fly   541 QPLRSFLLLQRKLPKCETGQSYSELLGEWDRDLVE--MLEANPSEFPLE--LYQSL---MRLAIR 598
            ..||:.|.....:.|     .:|:...:.|.||:.  ::|........|  ..|.|   :..|||
Zfish  1222 LKLRTDLRTLNLIHK-----HWSQSREDGDADLLRHTLVEKASQLISAEHRTAQDLLLHLEAAIR 1281

  Fly   599 DTPGK---------------LPMDLLKRY------------ASKNNWWHLLLVFQFFDLPLSELK 636
            |...|               ||:...:.:            |....|.|.||..|....|..:::
Zfish  1282 DALEKKTISRWSFEAAQEWALPVQFCRLHALPLSSAYPLDCAHDGQWLHFLLFVQTHQYPPQQVR 1346

  Fly   637 KLLPHFKSSPIGVHLLRALSYESSGDRHHKRTLQRPTRRSGETQTNSSQETMTNSSHSSNQDSSV 701
            .|...| |..:..|:  :|:::.         |:.|....|.:.|..|.:      .||:..:  
Zfish  1347 FLSESF-SPALQSHI--SLAFQD---------LRSPIEDQGVSVTPPSPD------ESSDWPT-- 1391

  Fly   702 QQLQRNTDQSLCTLLTHTARQDVFAIILCSTNSLPDELIATTPKFLEMMVGNSSHCSSINLLRHC 766
                                 ::|.::|.|.                    ...|...| ||...
Zfish  1392 ---------------------ELFQVLLQSQ--------------------EKPHPWRI-LLSEA 1414

  Fly   767 IRQELPILAVLAATISEQNRDWCWIVWLSVASGQWSLQLQEASKVRDENRSEWVW-----SVI-R 825
            :|:....||||||:........|..||:..:.....: .|||:...:|:.:..||     |:: :
Zfish  1415 VRRRCAPLAVLAASHQGSELLQCLCVWILTSVDDDDV-TQEAAAHINESPAHHVWNLHDLSILWK 1478

  Fly   826 GAVAGGHLNALLHSLEIFHPDCKLTHLCRFLQLTGHQEDFSDA---------TIVELRQFFFSWS 881
            ..::...:..|:...::|..:..|..:.:..:.....:|:..|         :::.||......|
Zfish  1479 TLLSRSKIRPLIRGFQLFQRESPLIAMLQMYEFCFDYKDYQRAKDKLLDFQKSLLNLRSSSVLSS 1543

  Fly   882 QDSVALPLCGPLPRKQLMQRSIGLLLIQLQSNFDCILQQQRFLECICRSDVGDICDLLDFCLLHK 946
            .|  .||:       |.::....:||:.|       |:|.|....:.|                 
Zfish  1544 SD--VLPV-------QWVESQASVLLLTL-------LKQSRTQYELRR----------------- 1575

  Fly   947 VFGVAATWLRELSIDLEQLGRRDSPEYK----------------------------------RLV 977
                    |.:|.:|:|:|.:.:.|:::                                  |::
Zfish  1576 --------LLQLLLDVEKLLKSNGPDFRLLSELSQLLCETPVCVSSRLLDCYSPSVLQEECVRIM 1632

  Fly   978 DALTEARAYEEALQLATLLQLPLTDIVYGKWMTELEAGQLRPHEEYEK-----------DIQQHA 1031
            :.|.:|..|.:|.::|.|.:||...::..:.:.:|.|.:|:...|.::           .:|...
Zfish  1633 EELQDAGLYMQARRVAELAELPAHTLIINQLLRDLSAQKLKRQWERQEIRLAFWRRSHDQLQTEH 1697

  Fly  1032 LAPAILVNFLLQAASVVGQ-----VSLRRYELLQSTLGV-IKKHHLFPNESF--DRDQIEYDMVL 1088
            :.|....:|.|..|.|..|     |:|:...:|....|: :.:....|:...  |.::.:::   
Zfish  1698 VQPETACHFFLSQAEVALQSDSELVNLQERCVLLGLAGLWLSRCDPPPSTPILADLEKRQWE--- 1759

  Fly  1089 CYLQ--LPEEQLPQLSIYH----SEYFEQIMLQERCVLYKSFSELKELAGIDDLSI------ADK 1141
            |.:|  |....|.:.|::.    ||...:.:|::     .|||.:..|....:||:      ::.
Zfish  1760 CRIQQRLLLADLERQSLFAPSALSEDSPENLLRD-----FSFSRMPALNDDANLSLDGLPADSNS 1819

  Fly  1142 TVLTSEMEDRLNTLLNTLLDKGDIVEALRLQELFEFRPNDLRFIVFAMALAEGMTSISNLSSKER 1206
            .:|..:.:..|.:|:...|:.|.:.||.|:...|.|...|:..::....||.|... ..|.|.: 
Zfish  1820 CILPDDQQRALASLIAQQLNDGSVNEASRVCRYFRFFHKDVWLVLRCRGLACGELQ-PELHSPD- 1882

  Fly  1207 QLLGEIEKSAFPKFNRITLNQNVITRWDSDLSDTCSDSVAMEFEEIPSKEKQQTLDTLLGIGSKL 1271
               ||..:|                     |..:.|.|....|..:.|.:.|..|...| :..:.
Zfish  1883 ---GESRRS---------------------LPSSPSMSSLSSFVVVSSPDDQLQLQLQL-LVDQC 1922

  Fly  1272 KYGVELGRRIVLAYRAAMYLDKEYLDVLRTKDTGILLK---SAAAEDCLQRLLVVSDIQISTRMT 1333
            .:|....::::..|:.:..|...:.::..::...:|.|   |..:|.|.:....:|    :..:.
Zfish  1923 SHGKSYCKQVLSLYQLSKELQCSFSELWSSEPECVLQKVLLSRQSERCKKAEAFIS----AQSLQ 1983

  Fly  1334 PKEIAECLA---LELTTCIVR----PRFYIFHAREQPRNALRNADLWGHSIDRDFHLFLELAPNS 1391
            |..:|..::   ||..|...|    ....||.|.:...:.|:.|.|.|               ::
Zfish  1984 PHTVANLISTAVLEGLTAHTRDADTSERLIFSASDSRESFLQLAKLCG---------------DA 2033

  Fly  1392 TMLGNCLLEYCDALKTYRRYQEGKPFEETEAFENLSKIITLYGLPTPSPTGTMSGIPQVLSHKKQ 1456
            .::||.||:...::                                  |...:|.|         
Zfish  2034 NLVGNKLLDSIGSV----------------------------------PLSDLSCI--------- 2055

  Fly  1457 NQIYVELLIKAHLCFVHECSMEGIVSVLQKAKAL-NTKLAQAKSWSLIVRLLIGIARYREMFYCF 1520
                |||||.||.||...|::||||.|||..:.| :|.||...:..|:||||.||.||.:|.|.|
Zfish  2056 ----VELLILAHDCFSVTCNLEGIVRVLQACRHLSHTHLAHGDAHGLLVRLLTGIGRYNDMTYVF 2116

  Fly  1521 DSLIENEQFESLLGQFDEDQKGGLRQAILSYLREYQPKNGKELLRLAALHFLMYKELAEMWTTEA 1585
            |.|.:|.:||.||.:..|... .|:.|:|.|::...| ...|...:.||.|.|.:|:.|.....|
Zfish  2117 DLLHQNHRFEMLLRKKVESNV-RLKTALLDYIKRCLP-GDSEKHNMVALCFSMCREIGENHEAAA 2179

  Fly  1586 QEIVTKI--QAFAAQSNKLKCSVEVQTLLQQALENYTHATENYLLDNKLLLAQQSVSRAELMAMQ 1648
            :..:..|  |.:...:...|..|:|||||:.|.|:|:.       |:.:..|.:.|..|:|:.:|
Zfish  2180 RTQLKLIESQPWVITAELKKALVKVQTLLKDAAESYSK-------DSCVRQAVRCVKLAKLVTLQ 2237

  Fly  1649 LDLCNKALEKRHSNNANHLCVSVIGVRSREQFRELVNVHLSVP---QALILSRAYGYDISWSEAI 1710
            |...|:.||.|           :|.:    |..:|.|...::|   |..:|:.||.:...|:| :
Zfish  2238 LHFLNQGLELR-----------IINL----QHTDLQNTSNTLPHCYQVFVLAEAYDFSPDWAE-V 2286

  Fly  1711 LSQFVVLQG-VNYLQEYLCHQRINDDVIEQIVKGYLLHIQSNATNSKQEESMVQLVGLIKSVVLK 1774
            |.|.|:::| .:||:|:..|:.:...:.:.| ...:.|.:..|:.|   :.:.:|:...:.|...
Zfish  2287 LYQKVIMRGDFSYLEEFKRHRPLAASLFQDI-SNKVCHQKPPASCS---QHLKKLLSHCEDVYTH 2347

  Fly  1775 YKLASILGFKSIVMSLINDSSV-YYLRD 1801
            ||||....|..:...|:.||.. .:|:|
Zfish  2348 YKLAYEHQFLDVANMLLQDSKTNSFLKD 2375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13531NP_611726.1 Spatacsin_C 1393..1746 CDD:464236 104/359 (29%)
spg11NP_001181923.2 None

Return to query results.
Submit another query.