DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3649 and slc-17.6

DIOPT Version :9

Sequence 1:NP_611725.2 Gene:CG3649 / 37626 FlyBaseID:FBgn0034785 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:486 Identity:111/486 - (22%)
Similarity:220/486 - (45%) Gaps:22/486 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PMWGVRHL--QVLFLFLCATLI---VAQRFNMSVAIVAFTNANSSNPN-YPEYRLTEPQKSYTIS 71
            |:|.::.:  |...|...|.::   :...|.|::..:..:...:.:|: :.|:...|....:|  
 Worm    18 PLWTLQSIRFQTALLISAACVVFGLMRTCFGMAMVDIVRSGNGTFHPDLHMEWSGDEQANIHT-- 80

  Fly    72 SPFWGSCCTQMMSGYLSSRFGAKVLLLTIMLLTALLSIATPF-ALAWGGWQLLFWVRFVQGLAMG 135
            |.:.|:......|.:|:.:.|.|.||...:||....|:.||| |:....:..:..:|.:.|...|
 Worm    81 SFYIGAFIAVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPVAAIRLIMGFGYG 145

  Fly   136 GMWPCLYTHLAKWCPKKEANRMGGIMTTGLDCGTIMGFALSGVLSASPL------GWPSTFYVPG 194
            .:.|.....::.|.|..|.:....|.||    |..:|.|:|..|:|...      |||..|.|.|
 Worm   146 FVIPAGSVLISSWFPLSEKSTAMAIFTT----GNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYG 206

  Fly   195 YLGIVWCLTFLRYGANSPSESKFISLAERKHIQFALEQNQVIRGATPPVPWLQILTSRPFIVLAF 259
            .:|.|:.:.:....|:.|.|||:|:..|..:|:...::...........|:::|:.:.....:..
 Worm   207 LIGAVFLVIWHVRLADKPRESKYITATELTYIKGGKQRRNRAETIVRATPYMKIILNGCVCAICA 271

  Fly   260 CKMSQACSFYTLMQQIPRYIHGIFHYSIAANALLSALPFVVMLMSSYGFIFLAEYLTRRRDISLP 324
            |..:|:.....|:..:|:|....|..::..|.:.|:|||.:.:::...|..:|:.: ::|.::..
 Worm   272 CSFAQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLFAIIADKV-KQRKVNAT 335

  Fly   325 ILRKTINSFATWTPAVALVILSYVSDQNVVGSMFCLIAATAAISGQAIGSSLNHVDLSPNFAGLL 389
            .:.|..|:.|::..|:.:||.:|....:.......:|.:.||.|....|.:.:.|.::|.|...:
 Worm   336 AVTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTSIVTVAPQFTAFI 400

  Fly   390 FGMSNTLMSAAGVISPIVIGLTVTKESDRSQWRTVFLGISVILFLGNLMYLIFGQMTVQSWNDSP 454
            ...:......|..::||||| .:|......:|:..|..::.:|.:..|::.|||....:.|.::|
 Worm   401 SSYAQLYAQIASTLAPIVIG-RITSHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEPWGETP 464

  Fly   455 SKETETEASPKPQASAPSVAEETISVERFNY 485
            |..|....|.........:.:.|: :|:.|:
 Worm   465 SNATSARLSTSVTMCEDGMCKLTL-LEKHNH 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3649NP_611725.2 MFS 22..442 CDD:119392 97/430 (23%)
2A0114euk 23..458 CDD:129972 103/445 (23%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 98/430 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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