DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9825 and F56A4.12

DIOPT Version :9

Sequence 1:NP_611723.3 Gene:CG9825 / 37624 FlyBaseID:FBgn0034783 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001303741.1 Gene:F56A4.12 / 186355 WormBaseID:WBGene00018920 Length:465 Species:Caenorhabditis elegans


Alignment Length:470 Identity:112/470 - (23%)
Similarity:189/470 - (40%) Gaps:84/470 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PVLGMRHVQ--ALLIFLNITTVFIGRLNVGVSVVAMTNAETTN----------------PNFPEY 55
            |..|...::  :..:|.|.|.::|..|.:........|..|.|                .|:.:.
 Worm     9 PEFGFPQIRKTSSFVFWNRTRLYIMVLTLACLTFIQMNTLTFNFTVICMEDIVEDYNLLTNYTDT 73

  Fly    56 DWTE--AEKSYILSSFFWGYILTQFLGGYLCKRFGVKSVMFWGVFGSGVCSA----LTPLFIGFG 114
            .|.|  .|||.:.|....|.::.......|....|:.:|...    ||:.||    |.||.:..|
 Worm    74 HWFERNTEKSLLFSGAAIGGLIGLIPAVPLISSLGLGNVQTI----SGIISAFGAFLFPLAVSIG 134

  Fly   115 EWQA-YCGIRVLMGLAQGVVFPCIHQHLAKWSPPEERNRLGALSHTGIECGNVSAMFLSGMIAKS 178
            .:.: .|  |:|.|:...::|..:......|:|..|.|...|:....::..|:..|.:||::.:|
 Worm   135 FYTSLLC--RILQGVGSAIMFTTVGVVPGVWAPSNEANTFMAILSCALQLSNIICMPVSGLLCES 197

  Fly   179 SLGWPGISYVSAGVAF-FWCTLWFVFAANHPTESRFIGENELIYIESSL--KHNESYHATIIPIP 240
            :|||..|.|:..|:.| .:...||.: ::.|...|.:.:.||..|.:..  |..|       |:|
 Worm   198 ALGWRSIYYLFGGLTFIIYIVFWFTY-SDDPKLHRNVSQKELGKISTGKIEKIKE-------PVP 254

  Fly   241 WKAIWTSAPFLALLIVRC-AENWGLSTLQAEIPSYMNGVLDMDMKSNAFFSALPFLAMWCMSYIY 304
            :.||.|. |.:.:....| ..|.....|....|:|:..:|..|::...|.|||||          
 Worm   255 YLAICTD-PTVLITWTSCFGGNMAFFALSLYGPTYLREILKFDVRETGFLSALPF---------- 308

  Fly   305 LVVADVLLGKNSVS--LTILRKTYNSIAFWIPAATLVGIGFLDKEQKNFAIALMTISVG------ 361
            ::.|.|..|...:|  :|.|.:....:.|   |||         .|..||:.|:.::..      
 Worm   309 ILSAIVKFGAGQLSDRMTFLSEKARFVFF---AAT---------SQIGFAVGLVVMAFTSDRLIA 361

  Fly   362 --------VNSAQTIGSVLNTIDL-SKNHASILMGIVNTAANFVPIVTPLVVGWIVKENSDRSQW 417
                    |:|...|..|:..|.| .:.|....:.:::..|..|..:.|::|..|..:|:. .||
 Worm   362 QIAFNFAIVSSGLNIMGVIKCIQLRCRQHVHFAIAVISFTAYVVQFLAPIIVSIICPDNTP-EQW 425

  Fly   418 QIVFIIASVIFFVGN 432
            .|:|:..:.:..|.|
 Worm   426 TILFLFITGVIIVCN 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9825NP_611723.3 2A0114euk 14..450 CDD:129972 110/465 (24%)
MFS 54..438 CDD:119392 101/407 (25%)
F56A4.12NP_001303741.1 MFS 81..443 CDD:391944 99/398 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.