DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and lgoT

DIOPT Version :10

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_418776.1 Gene:lgoT / 948879 ECOCYCID:EG12587 Length:453 Species:Escherichia coli


Alignment Length:472 Identity:107/472 - (22%)
Similarity:176/472 - (37%) Gaps:115/472 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLIFLNITTVFIGRLNVGVSVVAMTNAETTNPNFPEYDWTEAEKSYIFSSFFWGYILTQFIGGYL 83
            ||:|......::.|.:  :||..:|..|       |...:..|...:.|.|...|.:.|...|.|
E. coli    45 LLLFFAAVINYLDRSS--LSVANLTIRE-------ELGLSATEIGALLSVFSLAYGIAQLPCGPL 100

  Fly    84 CKRFGVK-----SVMFWGVF--VSGVCSALTPLFIGFGGWQAYCGIRVVMGLAQGLVFPCIHHHL 141
            ..|.|.:     .:.||.:|  :||:....|...:          :|:.||:.:..:.||....:
E. coli   101 LDRKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVL----------VRIGMGIGEAPMNPCGVKVI 155

  Fly   142 AKWSPPAERNR----LGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFAWCAI-WF 201
            ..|....||.|    ..|.|..|:.   ||...|:.|:.  .:||.|: :::.|:...:.|| |:
E. coli   156 NDWFNIKERGRPMGFFNAASTIGVA---VSPPILAAMML--VMGWRGM-FITIGVLGIFLAIGWY 214

  Fly   202 VFAAD------NAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCA 260
            :...:      .|||..|:....::.....|...|          |.:::.:.....:.|     
E. coli   215 MLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAE----------WRSLFRNRTMWGMML----- 264

  Fly   261 TWGLSTLQ-------AQIPTYMNGVLDMDMKSNAFFSALPFL----AMWIMSYVYLIIADVLLAG 314
              |.|.:.       |.:|.|:....::|:||....:|:|||    .|.:..||    .|.|:.|
E. coli   265 --GFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYV----TDWLVKG 323

  Fly   315 NRLSLTALRK------TFNSLAFW--IPCAT-------LIGIG-FLDQEQKNLAIALMTISVGVN 363
            ....:.: ||      .|.|.||.  :|.||       |||:. |...........|:.::|...
E. coli   324 GMAPIKS-RKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASR 387

  Fly   364 SGATIGSSLNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLF 428
            ..|::||                 |.|.|..:.....|:|.|.||   |....:::..||...:.
E. coli   388 MTASVGS-----------------IQNFASFICASFAPIITGFIV---DTTHSFRLALIICGCVT 432

  Fly   429 FVGNSVYLYFGTAVSQP 445
            ..|...|::.   |.||
E. coli   433 AAGALAYIFL---VRQP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 MFS_SLC17 18..439 CDD:340876 104/464 (22%)
lgoTNP_418776.1 MFS_ExuT_GudP_like 44..442 CDD:340877 104/463 (22%)

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