DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and slc17a5

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001070195.1 Gene:slc17a5 / 767760 ZFINID:ZDB-GENE-060929-1158 Length:488 Species:Danio rerio


Alignment Length:471 Identity:148/471 - (31%)
Similarity:238/471 - (50%) Gaps:39/471 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TAETNKGPVLGMRHVQALLIFLNITTVFIG---RLNVGVSVVAM----TNAETTNP-----NFP- 53
            |.:..|.|..|.....  |.||:....|:.   |:|:.|::|.|    :.|.|::.     |.| 
Zfish    23 TEDIQKAPACGSSRYG--LAFLSCYGFFVAYALRVNLSVAMVDMLKNSSKANTSSSICPPHNIPV 85

  Fly    54 --------EYDWTEAEKSYIFSSFFWGYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLF 110
                    .|||....:.:|..|||:|||:||..||||.:::|.|.::..|:..:.:.:.||||.
Zfish    86 PKHNHTAMVYDWNSETQGWILGSFFYGYIITQIPGGYLARKYGAKWLLGLGILCTVIFTLLTPLA 150

  Fly   111 IGFG-GWQAYCGIRVVMGLAQGLVFPCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGM 174
            ...| |:  ...:||:.|:.:|:.:|.:|...|.|:||.||:||..:|:||.:.|.|.|:.|||.
Zfish   151 ADLGAGY--LIAVRVLEGIGEGVTYPAMHAMWASWAPPLERSRLLTISYTGAQLGTVVALPLSGQ 213

  Fly   175 IAKSAIGWPGISYVSAGLAFAWCAIWFVFAADNAVESRYITQEELHYIESSLKH----NEDYHKT 235
            |. ..:.|..:.|:...:...|..:|..|.:::....:.||:.|..||.||||:    .:||   
Zfish   214 IC-FYLDWTYVFYIFGAVGLLWFFLWICFVSNSPSSHKRITEAEKTYIMSSLKNELSPTQDY--- 274

  Fly   236 VIPVPWMAIWTSAPFLALTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIM 300
               :||.:|:.|.|..|:.:......|...||...:|||||.||...::.|...||||:|..|::
Zfish   275 ---IPWTSIFKSMPLWAIVVAHFSYNWTFYTLLTLLPTYMNDVLGFSIQQNGMLSALPYLGCWLL 336

  Fly   301 SYVYLIIADVLLAGNRLSLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSG 365
            :.:...:||:|..........:||.|..:....|...|:..|:..... .||:|.:|||..:...
Zfish   337 ALLGGQLADLLRERFLFRTVIVRKAFTVVGMAGPAVFLVAAGYTGCNY-ILAVAFLTISSSLGGI 400

  Fly   366 ATIGSSLNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFV 430
            :..|.::|.:|::|::|.||:||.|:..|:..:|.|:|...:. :.:...||||||.|:|.:...
Zfish   401 SASGFNINHLDIAPSYAGILLGITNSFATIPGMVGPVIARSLT-KSNTIPEWQIVFYISAAINIF 464

  Fly   431 GNSVYLYFGTAVSQPW 446
            |...:..||....|||
Zfish   465 GAVFFTIFGKGTVQPW 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 144/459 (31%)
MFS 54..438 CDD:119392 126/388 (32%)
slc17a5NP_001070195.1 2A0114euk 27..488 CDD:129972 147/467 (31%)
MFS 92..472 CDD:119392 126/390 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582562
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D619250at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.