DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and slc37a4b

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001315024.1 Gene:slc37a4b / 393914 ZFINID:ZDB-GENE-040426-827 Length:453 Species:Danio rerio


Alignment Length:458 Identity:96/458 - (20%)
Similarity:172/458 - (37%) Gaps:79/458 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TTVFIGRLNVGVSVVAMTNAETTNPNFP----EYDWTEAEKSYIFSSFFWGYILTQFIGGYLCKR 86
            |.:||. :.||. ::...|.:|.:...|    |.:..:.|...|.||....|.:::||.|.|..|
Zfish    11 TVIFIS-MFVGY-MLYYFNRKTFSFLMPSVMEEIELDKEELGLITSSQTLAYAISKFISGVLSDR 73

  Fly    87 FGVKSVMFWGVFVSGV------CSALTPLFIGFGGWQAYCGIRVVMGLAQGLVFPCIHHHLAKWS 145
            ...:.:...|:|:.|.      ||:...||...  |       .|.|..||..:|.....|.||.
Zfish    74 ISARWLFSIGLFIVGTINIAFSCSSTVMLFTVL--W-------FVNGFGQGFGWPPCGKVLRKWF 129

  Fly   146 PPAERNRLGALSHTGME-CGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFAWCAIWFVFAADNAV 209
            .|::.....|:....|. .|::..:..:.::  ....|..|..||..:..|...:..:...:.. 
Zfish   130 EPSQFGTWWAILCCSMNLAGSLGPIITTVLV--QYYDWRVIMSVSGLICMAVAVVCLLMVKNEP- 191

  Fly   210 ESRYITQEELHYIESSLK---------HNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCATWG-L 264
                 :...|..|:...|         ::|...|..:..|::.:.::...:...:...|..|| |
Zfish   192 -----SDVGLPSIQPGAKKGKGKKGGPNDESSLKDFLLSPYLWVLSAGYLVVFGVKIACTDWGQL 251

  Fly   265 STLQAQIPTYMNGVLDMD-MKSNAFFSAL--PFLAMWIMSY----VY------LIIADVLLAGNR 316
            ..:|.:..:.|.|...|. ::...||.::  .:|:...::.    ||      |::  :::||..
Zfish   252 FLMQEKGQSAMMGSSYMSALEVGGFFGSIGAGYLSDRAVARQGLGVYGNPRHGLLL--MMMAGMA 314

  Fly   317 LSLTALRKTF-----NSLAFWI----PCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSSL 372
            :|:...|.|.     .....|:    |.:.|.|:     .:|.|.|.::..:.|.:|...|  :|
Zfish   315 VSMYLFRVTITPETPEEAPLWVLALHPVSVLTGV-----SEKELWILILGAAFGFSSYGPI--AL 372

  Fly   373 NTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAV--------LFF 429
            ..:..|.:..|...|..:..|.::..|...|.|:.......|..|...|.:|.|        .||
Zfish   373 FGVIASESAPSNFCGTSHAIVALMANVGAFIAGLPFSTIAKRYSWDTAFWVAEVSCAITTVCFFF 437

  Fly   430 VGN 432
            |.|
Zfish   438 VRN 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 96/458 (21%)
MFS 54..438 CDD:119392 88/426 (21%)
slc37a4bNP_001315024.1 UhpC 18..421 CDD:332119 86/429 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582586
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.