DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and SPCPB1C11.03

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001342988.1 Gene:SPCPB1C11.03 / 2539453 PomBaseID:SPCPB1C11.03 Length:570 Species:Schizosaccharomyces pombe


Alignment Length:455 Identity:102/455 - (22%)
Similarity:176/455 - (38%) Gaps:93/455 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLIFLNITTVFIGRLNVGVSVVAMTNAETTNPNFPEYDWTEAEKSYIFSSFFWGYILTQFIGGYL 83
            :|.||:: .:|||:..:..|.:...        |.:...|..:.:.:.:.|:.|||:.||.|.|:
pombe   105 MLGFLDM-MLFIGKATLSYSTILGL--------FDDVHITSNQYNNLNTLFYVGYIVGQFPGHYI 160

  Fly    84 CKRFG----VKSVMF-WGVFVSGVCSALTPLFIGFGGWQAYCGIRVVMGLAQGLVFPCIHHHLAK 143
            .:.|.    |..|.| |.|.|...|.|     ..:||..|   :|..:|..:..:.|.:...:..
pombe   161 MQTFPLGKFVGLVTFSWSVIVFLHCCA-----YNYGGLIA---LRFFLGFTESCLLPAMEATMGM 217

  Fly   144 WSPPAERNRLGALSHTG-MECGNVSAMFLSGM--IAKSAIGWPGISYVSAGLAFAWCAIWFVFAA 205
            :....|:..|..:.... :.||..:.....|:  :.||...|.....::.|:.|......|.:..
pombe   218 FFTHQEQAFLQPVFWISCLSCGIPAGFIAYGLEFVTKSIAPWKLFMIITGGITFFLSIFLFFYYP 282

  Fly   206 DNAVESRYITQEELHY------------IESSL-KHNEDYHKTVIPVPWMAIWTSAPFLALTLTR 257
            ||..::|::|.||..|            ||:.: |.::.......|:.|  ::|.|.| .|.|:.
pombe   283 DNPSKARFLTDEEKLYTIDRVRKSTRGGIENKIFKKHQFIEALKDPITW--LFTFAAF-TLMLSN 344

  Fly   258 CCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIAD--VLLAGNRLSLT 320
                 .|:..|..|.|.:| |.|::       |.|..:|:...:.|..|||.  :.|..|:.:..
pombe   345 -----NLAYQQNLIFTSLN-VSDLN-------STLVGVALAGYNTVSAIIATFAMYLIPNQSAYH 396

  Fly   321 ALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGAT--IGSSLNTIDLSPNHAS 383
            |:        ||:..:...||.|:.....|....|.|:.:..:.|.|  |.....|...:.....
pombe   397 AM--------FWMLPSITGGIAFVALPWSNRIGELATMIIASDFGITYIIALGWTTATSTGYTKK 453

  Fly   384 ILMGIL-NTAVTVVPIVTPLIVGVIVHEDDNRAEWQ-----------IVFIIAAVLFFVGNSVYL 436
            :..|:: .....:..|::|.:             ||           ||.|:.|  :||...:||
pombe   454 LTRGLMFMVGYAIANIISPQL-------------WQSRDAPRYYPAWIVQIVVA--WFVTPIIYL 503

  Fly   437  436
            pombe   504  503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 102/455 (22%)
MFS 54..438 CDD:119392 94/420 (22%)
SPCPB1C11.03NP_001342988.1 UhpC 102..494 CDD:332119 97/442 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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