DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and SPCC757.13

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_587688.1 Gene:SPCC757.13 / 2539039 PomBaseID:SPCC757.13 Length:522 Species:Schizosaccharomyces pombe


Alignment Length:433 Identity:72/433 - (16%)
Similarity:141/433 - (32%) Gaps:138/433 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YIFSS----FFWGYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQAYCGIRV 124
            :.:||    |:.||::.|:....|.::..:...:|..||   :.||:..|........:..|:|.
pombe   112 HTYSSMTTLFYAGYLVAQYPAAILMQKCRLSYFIFCNVF---LWSAMVCLMAACRNGPSLLGLRF 173

  Fly   125 VMGLAQGLVFPCIHHHLAKW----SPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGI 185
            :.|:.:..:.|...:..|.|    ..|.......|.:......|::.:..| |.|......|..:
pombe   174 LAGIFEASITPAFINITAMWYRREEQPMRTLCWYAFNGIAQIIGSILSYGL-GHIHGKVASWRYV 237

  Fly   186 SYVSAGLAFAWCAIWFVFAADNAVESRYITQEE----------------------LHYIES---- 224
            ..|...::..| .:.|||...|..::|:::..|                      .|..|:    
pombe   238 FIVIGLMSLGW-GVVFVFIPSNPSKARFLSSREKRIALERVRDNRTGLENKQFKWKHAYEAFLDP 301

  Fly   225 ---------------------------SLKHNEDYHKTVIPVPWMAIWTSAPFLA---------- 252
                                       .|.:|| .|..|:.:|..||..:|.|::          
pombe   302 QVIMITLFTGVCMITNGIGVFSTLIIKGLGYNE-LHSAVLNMPLGAIEVAAMFISGVLCKVFKNG 365

  Fly   253 ----------LTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSAL-PFLAMWIMSYVYLI 306
                      |||..|...|       :||           .||.:...: .:..||:.:...|:
pombe   366 RLLIGVFMNCLTLAGCLMIW-------KIP-----------DSNPYGRLVGVWFTMWVPASSALL 412

  Fly   307 IADVLLAGNRLSLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSS 371
            ::  |::.|....|  :||..|                           .|:.|..:.|..:...
pombe   413 LS--LISSNVAGYT--KKTVTS---------------------------ATVFVFYSVGNIVSPQ 446

  Fly   372 LNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNR 414
            |.....:|.:...:..:: .::.::..:..::.|..::|:..|
pombe   447 LFKSGQTPEYIEGIQAMI-VSLCIIIAIAFVLTGYYIYENKRR 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 72/433 (17%)
MFS 54..438 CDD:119392 72/433 (17%)
SPCC757.13NP_587688.1 MFS 80..477 CDD:119392 69/420 (16%)
2A0114 83..478 CDD:273326 69/421 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
TreeFam 00.000 Not matched by this tool.
44.050

Return to query results.
Submit another query.