DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and C18D1.2

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:492 Identity:106/492 - (21%)
Similarity:201/492 - (40%) Gaps:88/492 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MRH-VQALLIFLNITTVFIGR---LNVGVSVVAM--------TNAETTNPNFPE----------Y 55
            :|| .:..::||.:..:.|.:   |.:..:::.|        |.|...:.|..:          |
 Worm    10 IRHRTRFFILFLCLLCLSISQSNTLTLNFTIICMSTLHNFTATEASEKSTNVLDFMLHKILQKTY 74

  Fly    56 DWTEAEKSYIFSSFFWGYILTQFIGGYLCKRFGVKSVM-FWGVFVSGVCSALTPLFIGFGGWQAY 119
            .:|.::.:.:||:...|.:...:...|:.::.|.:||: |.|:| |...:|:.|       |.||
 Worm    75 VYTASQSNLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLF-SAATTAMIP-------WAAY 131

  Fly   120 CG------IRVVMGLAQGLVFPCIHHHLAKWSPPAERNRLGALSHTGMEC----GNVSAMFLSGM 174
            .|      :|.:.|:.....|..|.....:||...:    ||.....:.|    |.:..|.::..
 Worm   132 LGFYPLLAMRFLQGIGLSTGFTLIGIVTRQWSMQVQ----GAFFFACLSCFFQIGPIFTMPVASA 192

  Fly   175 IAKSAIGWPGISYVSAGLAFAWCAIWFVFAADNAVESRYITQEELHYIESSLKHNEDYHKTVI-- 237
            ...|:.|||.:.|..:.:......::|....::.|....:|:.||..|:......:.....::  
 Worm   193 FCTSSFGWPAVYYTHSIVTIFIFLLFFTLYRESPVFHTIVTELELSKIQRGKGETKRQRVPLVQI 257

  Fly   238 ---PVPWMAIWTS--APFLALTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAM 297
               ||. ::|||:  |.|:.:.||           ....|||::.:|...::....|||||.:  
 Worm   258 LRDPVV-LSIWTTALANFMGIQLT-----------MQFTPTYLHKILGFSVQDTGPFSALPQV-- 308

  Fly   298 WIMSYVYLIIADVLLAGNRLSL----TALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTI 358
             |.::|.:...   .:.::|..    |::| .|||||........:|:..:......|.:.::.:
 Worm   309 -ITAFVKVSAG---YSADKLQCCTPKTSVR-IFNSLALGGMSFMFVGLAIIPTSMPYLGLFMLIL 368

  Fly   359 S---VGVNSGATIGSSLNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIV 420
            |   :|.|.|.....|   ...:..|...:||:.:....:..::.|:||.:.| |:|...||..|
 Worm   369 SCSIIGFNCGGFFRCS---AIYAAQHNHFVMGMNSFLNCLAALLAPVIVNIFV-ENDTWNEWYWV 429

  Fly   421 FIIAAVLFFVGNSVYLYFGTAVSQPWDAEDYLTVKVP 457
            ::...|:.|:.|.|:..:.......|      |.|.|
 Worm   430 WMSHFVILFLSNLVFQIYAKGEPAEW------TKKTP 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 103/482 (21%)
MFS 54..438 CDD:119392 92/418 (22%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 96/446 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.