DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and slc-17.9

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001379067.1 Gene:slc-17.9 / 181189 WormBaseID:WBGene00011643 Length:516 Species:Caenorhabditis elegans


Alignment Length:478 Identity:115/478 - (24%)
Similarity:195/478 - (40%) Gaps:58/478 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ALLIFLNITTVFIGRLNVGVSVVAMTNAETTNPNFP---------------EYDWTEAEKSYIFS 67
            :.|:.|....:.||..|:..|:|.|.....||...|               ::.|:..::..|:|
 Worm    25 SFLLCLCFVALAIGTSNISQSMVCMVKKPDTNYTCPLAEPEVEAIPCNHPKQFAWSSIQQGLIYS 89

  Fly    68 SFFWGYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQAYCGIRVVMGLAQGL 132
            ...:| .|...|.|:...|...|..:...:....|.:|:.|:..| ..:.....:||:.|....|
 Worm    90 GQNFG-SLFMVITGWQADRLNGKWTIVAAMAFIIVSNAVLPISAG-ASFALVFFLRVLTGFGDAL 152

  Fly   133 VFPCIHHHLAKWSPPAER-NRLGALSHTGMECGNVSAMFLSGMI-----AKSAIGWPGISYVSAG 191
            :.|.....:.:|.||.|| :.||.:: :|.:.|.:..:.:.|.:     :|...|||.|.|:|:.
 Worm   153 LSPASSSLITRWFPPKERPSALGIVT-SGRQIGTLIILPIGGWLCGSDGSKFLGGWPAIFYLSSV 216

  Fly   192 LAFAWCAIWFVFAADNAVESRYITQEELHYIESSL------KHNEDYHKTVIPVPWMAIWTSAPF 250
            :|.|...||.||:||...:...|:..|..||...:      |.|...:     .||.||:||...
 Worm   217 VAAAVLVIWVVFSADKPSKHLCISHNEEAYINRKIEEENIGKRNNRKN-----TPWKAIFTSKQV 276

  Fly   251 LALTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGN 315
            ........|..:.|..:...:|.:.:.||.:....|...||||...:::...:...:|..|.|..
 Worm   277 WVAVAALVCHEFPLVIMLQFLPKFFSDVLGLSNTVNGLVSALPMAILFLSKCLSASLASYLTANG 341

  Fly   316 RLSLTALRKTFNSLAFWIPCATLIGIGF---LDQEQKNLAIALMTISVGVNSGATIGSSLNT--- 374
            .|..|...|.||.:|       .:|:|.   ......||..|:..|.:...:.|..|  |:|   
 Worm   342 YLRKTQSCKIFNFIA-------SLGLGICIAATPLMSNLQHAIWAIIILCLANAFAG--LHTPGV 397

  Fly   375 ----IDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVY 435
                :.|:|..:.|:.|:.....:...|...|::..|: ...::.||.|||.|:|.:..:....:
 Worm   398 LTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQIL-RTGSKHEWTIVFEISAFVAILPTIFF 461

  Fly   436 LYFGTAVSQPWDAEDYLTVKVPE 458
            ..:|:|....|.:.   .|.||:
 Worm   462 TLWGSAERTEWASN---RVSVPK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 112/468 (24%)
MFS 54..438 CDD:119392 98/405 (24%)
slc-17.9NP_001379067.1 2A0114euk 5..474 CDD:129972 112/466 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 1 1.010 - - D619250at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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