DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and R10D12.1

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_506456.1 Gene:R10D12.1 / 179888 WormBaseID:WBGene00011185 Length:485 Species:Caenorhabditis elegans


Alignment Length:466 Identity:105/466 - (22%)
Similarity:199/466 - (42%) Gaps:67/466 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MRHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETT------NPNFPEYDWTEAEKSYIFSSFFW 71
            :|::..:...|.:|::....:....:|:.|..:..|      ..:|..|  |..||:.:.|:...
 Worm    35 VRYLIMISTMLCLTSLMSNVVCFNFTVLCMPGSGETGELVGNRTHFVGY--TRQEKTVLLSTVAI 97

  Fly    72 GYILTQF---IGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGG---WQAYCGIRVVMGLAQ 130
            |.:...|   ||   ..:.|:|.|.    ..|||.:|::...|....   :..:..:|.|.||:.
 Worm    98 GAVCGVFPVIIG---ISKLGLKKVF----MTSGVLTAISTFLIPILAPLHFHLFIMLRFVQGLSY 155

  Fly   131 GLVFPCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFA 195
            ...||.:....:.|:..|::....|...|..:..::.:|.::|.:..|..||..:.|:.|.::..
 Worm   156 AACFPAVGAITSSWASLAQQGLFIAALTTFGQTSSIFSMPVAGELCTSVFGWKSVFYLHAIISLV 220

  Fly   196 WCAIWFVFAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCA 260
            ...|||....|:..:::.:...||..||.. |..::.|:          .::.|:|.:..|.  :
 Worm   221 VFTIWFALFTDSPEDNKLVRPAELAEIEFG-KSEDEIHE----------HSNTPYLEILTTP--S 272

  Fly   261 TWGL------STLQAQI-----PTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAG 314
            .||:      ..:..|:     |.:::.|.....:...|.:|:|.|..:.:.         :.||
 Worm   273 VWGIWIGAFGDLIAVQLIHIYSPVFLHDVGGYSFEKTGFAAAVPVLFQFFVK---------MFAG 328

  Fly   315 NR------LSLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGV---NSGATIGS 370
            :.      :|.|...:.:|::|.......|:.:||:.|.|..|.:.|||::.|:   |.|   |.
 Worm   329 HSSDKVHGISETTKLRIYNTIALGASAIFLVSLGFVKQGQGVLGLVLMTLATGMFGFNGG---GF 390

  Fly   371 SLNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVY 435
            |.....:|..:...:|.|....|.:..||.|:||..|: :....|||:|||.:.|.:..:.|:::
 Worm   391 SKCAALVSRQYNHFVMAIQQILVCLSMIVCPIIVSTIL-QHGTTAEWRIVFFVHAAILLICNAIF 454

  Fly   436 LYFGTAVSQPW 446
            .:..||...||
 Worm   455 CWLATAKPAPW 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 105/465 (23%)
MFS 54..438 CDD:119392 94/409 (23%)
R10D12.1NP_506456.1 MFS 55..455 CDD:391944 98/434 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.