DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and slc-17.8

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001023848.1 Gene:slc-17.8 / 179234 WormBaseID:WBGene00017798 Length:527 Species:Caenorhabditis elegans


Alignment Length:458 Identity:116/458 - (25%)
Similarity:200/458 - (43%) Gaps:42/458 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETT--NPNFPE-----YDWTEAEKSYIFSSFFW 71
            |.:.::::......|.:...|:|:::|.|.|:..|  |..:||     .||:..|:.||||:|..
 Worm    53 RFMTSIMLCFCFGCVHLMNSNMGMAIVCMVNSSATYDNETYPENAAPLLDWSSDEQGYIFSAFNA 117

  Fly    72 GYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQA----YCGI--RVVMGLAQ 130
            |.::..|.|| :..:|..|.::...|.::.:.:...|       |.|    |..|  |.::|.|.
 Worm   118 GLLVMLFTGG-MADKFNAKYMILVSVAIASLANFTLP-------WMAPISVYWAIFSRFLVGFAD 174

  Fly   131 GLVFPCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAI---GWPGISYVSAGL 192
            .|:.|.::..:.:|.|.:||:....|:..|.:.|.:..:..:|.:.....   |||.|.|:|..:
 Worm   175 ALLQPAMNSLITRWFPTSERSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFI 239

  Fly   193 AFAWCAIWFVFAADNAVESRYITQEELHYIESSLKHNEDYHK--TVIPVPWMAIWTSAPFLALTL 255
            ...:...:....||...:...|:..||.:|..| ..:||..|  |...|||..|..|....|..:
 Worm   240 GVLFIFSYIFLGADKPSKQSCISDNELKFITIS-NQSEDVGKKRTERKVPWKNILKSGAVWASVI 303

  Fly   256 TRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRLSLT 320
            :..|..:.|.||...:|:|::.|.......|...||||.:::|........:...|.........
 Worm   304 SLVCHEFPLMTLIMFLPSYLHDVHHYHSTENGILSALPTVSLWFAKIGSSYLNTWLQKNTTWKKD 368

  Fly   321 ALRKTFNSLAFWIPCATLIGIG-------FLDQEQKNLAIALMTISVGVNSGATIGSSLNTIDLS 378
            .:.|..||:.       .||:|       |||.|...:|:..:.:|:......|.|..|..:.::
 Worm   369 TICKVLNSIG-------SIGLGVFLLAATFLDNEHAWMAVLFLCLSMASAGLHTPGCQLALVSVA 426

  Fly   379 PNHASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVS 443
            |.::..:.|.....|.|..|:.|:|..:|| :|...|||.:||.|:.|:......::..:|:...
 Worm   427 PAYSGAVTGFTFFFVAVSGIIHPIITKMIV-KDRTAAEWNLVFYISTVIAIFPIIIFNVWGSTEV 490

  Fly   444 QPW 446
            |.|
 Worm   491 QWW 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 116/458 (25%)
MFS 54..438 CDD:119392 103/406 (25%)
slc-17.8NP_001023848.1 MFS_SLC17 57..486 CDD:340876 112/445 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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