DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and C01B4.7

DIOPT Version :10

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_503683.1 Gene:C01B4.7 / 178722 WormBaseID:WBGene00015271 Length:475 Species:Caenorhabditis elegans


Alignment Length:467 Identity:106/467 - (22%)
Similarity:198/467 - (42%) Gaps:59/467 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QALLIFLNITTVFIGRLNVGV---SVVAMTN--AETTNPNFPEYDWTE--AEKSYIFSSFFWGYI 74
            :..::.|::|.:.:.::|..:   :|:.|.:  .|....|..|..|.|  .|||.:||:...|.:
 Worm    38 RVFILILSLTCMTLTQINSQIFTFTVICMDDLIVEQQTSNLTEPHWIEGTTEKSILFSATAIGAL 102

  Fly    75 LTQFIGGYLCKRFGVKSVMFWGVFVSGVCSAL----TPLFIGFGGW-QAYCGIRVVMGLAQGLVF 134
            :.......:....||:..:.:    .|:||.|    |||.:.:..: ..:|  ||:.|:...::.
 Worm   103 VALIPSVPILNSLGVRLTLSF----CGLCSTLGTFFTPLAVTYSFYLVVFC--RVLQGIGISVIL 161

  Fly   135 PCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFAWCAI 199
            ..:....:.|||..|.:...|:.....:..||..|.:||::..|:.||..|.||.......:..:
 Worm   162 TVLGVIPSYWSPKTEYSTYLAILSCAWQFSNVIFMPISGILCDSSFGWRSIYYVFGVATGFFYFV 226

  Fly   200 WFVFAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCATWGL 264
            :|:|..|.....:.::::||    ..:...:..|.....||:..|.|....|:..::......|.
 Worm   227 FFMFYTDIPGIHKNVSEKEL----GQIVEGKPEHTVREAVPYWKICTDRCVLSAWVSFLGGNLGF 287

  Fly   265 STLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRLSLTALRKTFNS- 328
            .||....|||:..||..|::|..:.:|||:....|..:....|:|             |.||.| 
 Worm   288 ITLLLYGPTYLREVLQFDVRSTGYINALPYALCAIYKFGAGKISD-------------RVTFASD 339

  Fly   329 ---LAFWIPCATL-IGIGFLDQ---EQKNLAIALMTISVGVNSGATIGSSLNTIDL-SPNHASIL 385
               ..||:..:.: :|||::..   ..:|:|......:| |.||..|.:.:..:.: ...|....
 Worm   340 KAIYTFWLFSSIIGLGIGYIIMAWTSDRNVAFVAFAFAV-VTSGLIIMACVKCLAMRCQQHCHFA 403

  Fly   386 MGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPW---- 446
            :..::.....|..::||.||::. .|:...:|..:|||..::..:.|:.:         ||    
 Worm   404 VSAISFLSYCVQFISPLGVGILC-PDNTPDQWSRLFIIITLIMIITNAPF---------PWLTTQ 458

  Fly   447 DAEDYLTVKVPE 458
            .|.:|...|.|:
 Worm   459 QAANYTKRKDPK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 MFS_SLC17 18..439 CDD:340876 100/441 (23%)
C01B4.7NP_503683.1 MFS 89..>332 CDD:475125 61/252 (24%)

Return to query results.
Submit another query.