DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and M117.1

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_502234.2 Gene:M117.1 / 178112 WormBaseID:WBGene00010918 Length:523 Species:Caenorhabditis elegans


Alignment Length:497 Identity:117/497 - (23%)
Similarity:206/497 - (41%) Gaps:98/497 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGMRHVQALLIFLNITTVFIGRLN--VGVSVVAMTNAETTNPNFPE------YDWTEAEKSYIFS 67
            |.|:|....:||: :|.:.:|.:.  |.|...:|...|..:....|      |.:|..|||.:.|
 Worm    70 LSMKHRIRWVIFI-LTWLQLGSVMNCVDVFSFSMVYMEKNSTIAAEAGLDDIYIYTLEEKSSLIS 133

  Fly    68 SFFWGYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGW--QAYCGIRVVMGLAQ 130
            :...|.::..:....|.:::|.:.|:   .|.|.:|:.:|    .|..|  .....:.:|..:.|
 Worm   134 AMAIGSLIGMYPQNVLMQKYGPRLVL---TFASLLCAVVT----AFMPWALDTNYHVALVFRIFQ 191

  Fly   131 GLV----FPCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSA------------ 179
            |::    |..:.:..:||||         :...||     |...|||..|..|            
 Worm   192 GILYSADFGVVGYVCSKWSP---------IKEVGM-----SLAALSGFTAARAVIQLPLAGWTTS 242

  Fly   180 -IGWPGISYVSAGLAFAWCAIWFVFAADNAVESRYITQEELHYIESSLKHNE----DYHKTVIPV 239
             :||..|.|:.:.:.|....|||:|..|:..:...:|..||.:|....|.::    .|.:.:...
 Worm   243 NVGWRPIYYILSIILFISTIIWFLFYRDDPEDHCLMTHHELQHIGGGTKRDKTKKTPYREVLTDK 307

  Fly   240 PWMAIWTSAPFLALTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYV- 303
            ...|:|. |.|..:..:.....:|     ||...|    |.||:::||          |:.|.. 
 Worm   308 SVWAVWV-AGFADIFASFVFLVYG-----AQYYQY----LGMDIQANA----------WLNSMKG 352

  Fly   304 YLIIADVLLAG------NRLSLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTI---S 359
            ||.|...:.||      ..|...:..:.||:::..:|...|:.:..|.:|...|.:..:|.   |
 Worm   353 YLFIGVRVFAGIASDRIRTLPEKSKLRLFNTISLQVPAFFLMLVVLLPREHPYLHVICITFYQAS 417

  Fly   360 VGVNSGATI-GSSLNTIDLSPNHASILMGILNTAVTVVPIVTPLIVGVIV--HEDDNRAEWQIVF 421
            .|.|.|... |::|    :|...:..::|.:....::..::.|::..::|  ..:|:...|...|
 Worm   418 FGFNCGGFYKGAAL----ISRQFSYFVIGYIQLFKSLATLLEPVLFSLLVLPGSEDSELSWTSYF 478

  Fly   422 IIAAVLFFVGNSVYLYFGTAVSQPWD----AEDYLTVKVPEL 459
            :|.|:...|.|:||:..  |.|:|.|    ||  |.:..|:|
 Worm   479 LIHALTLTVANTVYVLL--ARSEPADFVLNAE--LELSKPQL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 111/483 (23%)
MFS 54..438 CDD:119392 97/425 (23%)
M117.1NP_502234.2 2A0114euk 66..499 CDD:129972 109/476 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.