DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and Y4C6B.4

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_741396.1 Gene:Y4C6B.4 / 177312 WormBaseID:WBGene00021158 Length:458 Species:Caenorhabditis elegans


Alignment Length:463 Identity:114/463 - (24%)
Similarity:194/463 - (41%) Gaps:54/463 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RHVQALLIFLNITTVFIGRLNVGVSVVAMTN--AETTNPN---FPEYDWTEAEKSYIFSSFFWGY 73
            |.:..||.|:.:.:|....:.:..:.:.|.:  ::||..|   ...||:|..||.||..:..:|.
 Worm    10 RIIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEKKYILWAVAFGT 74

  Fly    74 ILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQAYCGIRVVMGLAQGLVFPCIH 138
            ::..|....|..::|.:...|....:|.|.:.|||.......| .:..:|.:.|:|....|..|.
 Worm    75 MVGTFPINILYVKYGARIPFFSAGVLSAVTTGLTPWAAAQSMW-IFVALRFLQGVAYSADFAAIG 138

  Fly   139 HHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYV-SAGLAFAWCAIWFV 202
            ..::||:|..|.....|...:.....::.....||:|. ..:||....|. ||.....:|. |.:
 Worm   139 IVISKWAPLDETAIFIATLTSFTSIASIITNGASGVIC-DTLGWQWSFYFHSATCLLIFCC-WVL 201

  Fly   203 FAADNAVESRYITQEELHYIESSLKHNEDYH-KTVIPVPWMAIWTSAPFLALTLTRCCATWGLST 266
            ...|:....:.::.:||.:|:   |:..:.| |..:.||:.||:||...|.:.|   ||...|||
 Worm   202 IYQDDPTFHKSVSVKELGWIQ---KNKSEAHIKVGMKVPYKAIFTSPVVLTVWL---CAFTELST 260

  Fly   267 L---QAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADV--LLAGNRLSLTALRK-- 324
            |   ....|.|...||..|:|...|:       :.||..::|....|  .|:.....::.:.|  
 Worm   261 LILIATYGPIYFRSVLGFDIKIIGFY-------LGIMIAIHLPFRFVCAFLSDKTKCISEMGKIH 318

  Fly   325 TFNSLAFWIPCATLIGIGFL----DQEQKNLA----IALMTISVGVNSGATIGSSLNTIDLSPNH 381
            .||:||     ...:||.||    ...:.|::    :|::...:..|||...  ...|:     |
 Worm   319 IFNTLA-----VGFVGISFLIFGKIPPEHNISAVVCLAILECFISFNSGGFY--KCGTL-----H 371

  Fly   382 ASILMGILNTAVTVVPIVT----PLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAV 442
            |.....|:.:|:.....::    |.:|...|.::.|:.:|..||:..|...||.|.:...|.|..
 Worm   372 ARQFSSIVISAIQFTKCISLFSGPALVAFFVTDESNQTQWSHVFMTLAGFSFVANILSFIFFTDK 436

  Fly   443 SQPWDAED 450
            ...|..:|
 Worm   437 PAKWTEDD 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 113/461 (25%)
MFS 54..438 CDD:119392 101/404 (25%)
Y4C6B.4NP_741396.1 MFS 15..432 CDD:391944 109/444 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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