DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and vglu-2

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499276.1 Gene:vglu-2 / 176441 WormBaseID:WBGene00010755 Length:573 Species:Caenorhabditis elegans


Alignment Length:487 Identity:127/487 - (26%)
Similarity:213/487 - (43%) Gaps:34/487 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ETNKGPVLGMRHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETTNPNF---------PEYDWTE 59
            |.||..:..:|...|||........|..|.|.||:...|.|      ||         .|:.||.
 Worm    37 EDNKFFLRKVRWQIALLAHFGFAISFGIRSNFGVAKNRMIN------NFTDAYGEVHEKEFFWTG 95

  Fly    60 AEKSYIFSSFFWGYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQ--AYCGI 122
            .|...:.||||:||..:|...|.:..:|....:...|:..:.:.:.:|.:.:.|..:.  ....|
 Worm    96 TEVGMMESSFFYGYAASQIPAGVIAAKFAPNKLFMLGILFASLLNIVTAICLNFHPFTDIFVMVI 160

  Fly   123 RVVMGLAQGLVFPCIHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISY 187
            :|:.|||.|:.:|.:|.....|:||.||::|...:.||...|.:..:..|..:. |...|....|
 Worm   161 QVMQGLALGVCYPAMHGVWKYWAPPLERSKLATTTFTGASVGVMVGLPASAYLV-SHFSWSTPFY 224

  Fly   188 VSAGLAFAWCAIWFVFAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLA 252
            |...|...|..:|...:..:.....||:.:|..||...:......:.|:..:||..:.||....|
 Worm   225 VFGALGIVWSILWIYVSGTSPETHGYISADEKKYITEKVGSVAVKNMTLTTLPWRDMMTSTAVWA 289

  Fly   253 LTLTRCCATWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRL 317
            :.:...|.:|....|.....|||..||.:|:|::...:..|.|.|.|::.....::|.|.:..::
 Worm   290 IIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNSGLIAIFPQLGMCIVTLTSGQLSDYLRSSGKM 354

  Fly   318 SLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATI-GSSLNTIDLSPNH 381
            |..|:||:.|:..|.:....|..:.|:  ....:|:..:.|:.. .:||.: |.::|..|::|.|
 Worm   355 STEAVRKSVNTFGFTVEAVMLGCLAFV--RDPVIAVTFLIIACS-GAGAVLSGFNVNHFDIAPRH 416

  Fly   382 ASILMGILNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPW 446
            |.|||||.| .:..:..|..::...:.::  |...||.||::|..:...|...:|.|......||
 Worm   417 APILMGIAN-GLGAIAGVGGIVTNSLTYQ--NPDGWQWVFLLAMSIDIFGIIFFLIFAKGDVLPW 478

  Fly   447 DAEDYLTVKVPELAKVPAIHEAGKGIDDLPRS 478
            ..|       ||  |....:|..:.:..:.||
 Worm   479 ARE-------PE--KEETFNEFVRRMSTMVRS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 117/447 (26%)
MFS 54..438 CDD:119392 101/386 (26%)
vglu-2NP_499276.1 MFS 51..458 CDD:391944 111/419 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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