DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and eat-4

DIOPT Version :10

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499023.3 Gene:eat-4 / 176291 WormBaseID:WBGene00001135 Length:576 Species:Caenorhabditis elegans


Alignment Length:471 Identity:132/471 - (28%)
Similarity:218/471 - (46%) Gaps:27/471 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETTNP----NFPEYDWTEAEKSYIFSSFFWGYI 74
            |.:.|:|..:.....|..|.|.|.:...|.. ..|:|    :..|::||..|.|.:.||:|:||:
 Worm    69 RWLLAILANMGFMISFGIRCNFGAAKTHMYK-NYTDPYGKVHMHEFNWTIDELSVMESSYFYGYL 132

  Fly    75 LTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQAY--CGIRVVMGLAQGLVFPCI 137
            :||...|:|..:|....:..:|:.|....:.|.|  .||.....|  ..|::..||.||:.:|.:
 Worm   133 VTQIPAGFLAAKFPPNKLFGFGIGVGAFLNILLP--YGFKVKSDYLVAFIQITQGLVQGVCYPAM 195

  Fly   138 HHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFAWCAIWFV 202
            |.....|:||.||::|...:.||...|.|..:.||..:. |.:.|....|:.......|..:||.
 Worm   196 HGVWRYWAPPMERSKLATTAFTGSYAGAVLGLPLSAFLV-SYVSWAAPFYLYGVCGVIWAILWFC 259

  Fly   203 FAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCATWGLSTL 267
            ...:.......|:|||..:||.::.|..:.|.|:..:||.||.||.|..|:.:.....:|....|
 Worm   260 VTFEKPAFHPTISQEEKIFIEDAIGHVSNTHPTIRSIPWKAIVTSKPVWAIIVANFARSWTFYLL 324

  Fly   268 QAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLI---IADVLLAGNRLSLTALRKTFNSL 329
            .....|||...|.|.:..:...:|:|.|   :|..|.|:   :||.|.:...||.||:||.||..
 Worm   325 LQNQLTYMKEALGMKIADSGLLAAIPHL---VMGCVVLMGGQLADYLRSNKILSTTAVRKIFNCG 386

  Fly   330 AFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSSLNTIDLSPNHASILMGILNTAVT 394
            .|....|.::.:.:...:  ..||..:..:||::..|..|.::|.:|::|.:|:||||..|...|
 Worm   387 GFGGEAAFMLIVAYTTSD--TTAIMALIAAVGMSGFAISGFNVNHLDIAPRYAAILMGFSNGIGT 449

  Fly   395 VVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPW----DAEDYLTVK 455
            :..:..|.:.......  ::..|..||::|:::.|.|.:.|..:.:...|.|    :.|::..  
 Worm   450 LAGLTCPFVTEAFTAH--SKHGWTSVFLLASLIHFTGVTFYAVYASGELQEWAEPKEEEEWSN-- 510

  Fly   456 VPELAKVPAIHEAGKG 471
             .||.....|:..|.|
 Worm   511 -KELVNKTGINGTGYG 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 MFS_SLC17 18..439 CDD:340876 123/429 (29%)
eat-4NP_499023.3 MFS_SLC17A6_7_8_VGluT 73..492 CDD:340940 123/429 (29%)

Return to query results.
Submit another query.