DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12490 and slc-17.6

DIOPT Version :10

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:448 Identity:105/448 - (23%)
Similarity:199/448 - (44%) Gaps:26/448 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MRHVQALLIFLNITTVFIGRLNVGVSVVAMTNA--ETTNPNFPEYDWTEAEKSYIFSSFFWGYIL 75
            :|...||||........:.|...|:::|.:..:  .|.:|:. ..:|:..|::.|.:||:.|..:
 Worm    25 IRFQTALLISAACVVFGLMRTCFGMAMVDIVRSGNGTFHPDL-HMEWSGDEQANIHTSFYIGAFI 88

  Fly    76 TQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPL-FIGFGGWQAYCGIRVVMGLAQGLVFPCIHH 139
            ..|...:|.|:.|.|:::.:.:.::...|.|||. .|....:.....||::||...|.|.|....
 Worm    89 AVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPVAAIRLIMGFGYGFVIPAGSV 153

  Fly   140 HLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAI--GWPGISYVSAGLAFAWCAIWFV 202
            .::.|.|.:|::...|:..||.:.|...:|||:..:.:...  |||.:..|...:...:..||.|
 Worm   154 LISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYGLIGAVFLVIWHV 218

  Fly   203 FAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRC----CA--- 260
            ..||...||:|||..||.||:.. |...:..:|::        .:.|::.:.|..|    ||   
 Worm   219 RLADKPRESKYITATELTYIKGG-KQRRNRAETIV--------RATPYMKIILNGCVCAICACSF 274

  Fly   261 --TWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRLSLTALR 323
              ::.|..|...:|.|......|::..|..:|:|||....|...::.|||| .:...:::.||:.
 Worm   275 AQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLFAIIAD-KVKQRKVNATAVT 338

  Fly   324 KTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSSLNTIDLSPNHASILMGI 388
            |..|::|.:.....::...:...:...|....:.:|:...|....|.:.:.:.::|...:.:...
 Worm   339 KVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTSIVTVAPQFTAFISSY 403

  Fly   389 LNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPW 446
            ......:...:.|:::|.|. ......||:..|...|.:..|...::..||...::||
 Worm   404 AQLYAQIASTLAPIVIGRIT-SHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 MFS_SLC17 18..439 CDD:340876 100/434 (23%)
slc-17.6NP_490947.2 MFS 30..453 CDD:475125 100/434 (23%)

Return to query results.
Submit another query.