DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12490 and slc-17.6

DIOPT Version :9

Sequence 1:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:448 Identity:105/448 - (23%)
Similarity:199/448 - (44%) Gaps:26/448 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MRHVQALLIFLNITTVFIGRLNVGVSVVAMTNA--ETTNPNFPEYDWTEAEKSYIFSSFFWGYIL 75
            :|...||||........:.|...|:::|.:..:  .|.:|:. ..:|:..|::.|.:||:.|..:
 Worm    25 IRFQTALLISAACVVFGLMRTCFGMAMVDIVRSGNGTFHPDL-HMEWSGDEQANIHTSFYIGAFI 88

  Fly    76 TQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPL-FIGFGGWQAYCGIRVVMGLAQGLVFPCIHH 139
            ..|...:|.|:.|.|:::.:.:.::...|.|||. .|....:.....||::||...|.|.|....
 Worm    89 AVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPVAAIRLIMGFGYGFVIPAGSV 153

  Fly   140 HLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAI--GWPGISYVSAGLAFAWCAIWFV 202
            .::.|.|.:|::...|:..||.:.|...:|||:..:.:...  |||.:..|...:...:..||.|
 Worm   154 LISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYGLIGAVFLVIWHV 218

  Fly   203 FAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRC----CA--- 260
            ..||...||:|||..||.||:.. |...:..:|::        .:.|::.:.|..|    ||   
 Worm   219 RLADKPRESKYITATELTYIKGG-KQRRNRAETIV--------RATPYMKIILNGCVCAICACSF 274

  Fly   261 --TWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRLSLTALR 323
              ::.|..|...:|.|......|::..|..:|:|||....|...::.|||| .:...:::.||:.
 Worm   275 AQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLFAIIAD-KVKQRKVNATAVT 338

  Fly   324 KTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSSLNTIDLSPNHASILMGI 388
            |..|::|.:.....::...:...:...|....:.:|:...|....|.:.:.:.::|...:.:...
 Worm   339 KVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTSIVTVAPQFTAFISSY 403

  Fly   389 LNTAVTVVPIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPW 446
            ......:...:.|:::|.|. ......||:..|...|.:..|...::..||...::||
 Worm   404 AQLYAQIASTLAPIVIGRIT-SHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 105/447 (23%)
MFS 54..438 CDD:119392 91/395 (23%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 100/434 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 1 1.010 - - D619250at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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