DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30265 and T19D12.9

DIOPT Version :9

Sequence 1:NP_001286747.1 Gene:CG30265 / 37622 FlyBaseID:FBgn0050265 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_495353.1 Gene:T19D12.9 / 174098 WormBaseID:WBGene00020583 Length:462 Species:Caenorhabditis elegans


Alignment Length:463 Identity:102/463 - (22%)
Similarity:192/463 - (41%) Gaps:71/463 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLLFFNITCLYIGRLN---VGVAVVAMTNAESTNPDFPEYDW--TLTQKSYILSSFFWGYIITQF 78
            ::|...:.|:.....|   :..:|:.|.:..|......:..|  .....|:|.|:...|.||..|
 Worm    23 IVLIIGLCCICCTNANYNAINFSVICMQDVISEQSVVNQTHWLENTADVSFIFSAGAAGAIIGLF 87

  Fly    79 LGGYLCKRYGVKSVMLWGSFASGIFSALTPLFIGFGEWQAYCGIRVLMGFAQGLIFPCIHQHLAR 143
            ....|..::||::|:.:....:.:.:.|.||.:..|.:.... ||:..||...::|..|......
 Worm    88 PSVPLTTKFGVRNVLSFYGLLTAVSTLLIPLAVSIGYYPVII-IRMFQGFGASILFSAIGSISEG 151

  Fly   144 WSPPAERNRLGALSHTGIECGNVCAMFFSGMIAKSAIGWPGISYVSAGLALAWCAFWFVFAADNA 208
            |||.||.:...|....|.:..::..|..||::.:|.:||..|.|:..|:::.....:|.|..|:|
 Worm   152 WSPIAEISTYVAFLSAGFQISSIILMPVSGVLCESQLGWRYIFYLFGGISVIAHIIFFTFFRDSA 216

  Fly   209 EESRYITQEELHYIESSLKHNEDYHKTVIP------VPW---------MAIWTSA-----PFFAL 253
            ...|.::.:||..|.:..          :|      ||:         ::||.:|     .|.||
 Worm   217 TVHRNVSGKELRKISTGR----------LPTAGRQTVPYLDICKDKVVLSIWAAAIGGNMSFMAL 271

  Fly   254 MVARCCETWGLSTLQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLL----AG 314
            :      |:|        |||:|.||.:|.:...|.:|:|::....:.:|...::|.:.    ..
 Worm   272 I------TYG--------PTYLNKVLGLDARETGFLNAIPYMLATAVKFVAGPLSDHMTFIPETW 322

  Fly   315 NRLSLTALRKIFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTIS-VGVNSGATIGSSLNTIDLS 378
            ..:...||.::..::.|::  ..|.....:.|.....||.|..|: |||...|.:        ::
 Worm   323 RMIFFAALSQLGLAIGFFV--MALTNSKLIAQIAYTAAIVLAGINIVGVVKCAQM--------VA 377

  Fly   379 PNHASILMGIVNTAANVVPIVTPLAVGLIVHEDKNREEWQIVFIIAAVIFFIGNCVFLYYGTAVS 443
            ..|...:|.:::.:|.....:.|:.:|.:. .:....||.:.:....:...|.|..|.::.|   
 Worm   378 RQHVHFVMAVISLSAWGAIFLLPIIIGFVC-PNHTASEWAVFYTAVGIWVIIMNVPFPFFAT--- 438

  Fly   444 QPWDAEDY 451
              .||.:|
 Worm   439 --MDAAEY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30265NP_001286747.1 2A0114euk 14..450 CDD:129972 101/460 (22%)
MFS 18..438 CDD:119392 98/448 (22%)
T19D12.9NP_495353.1 MFS 23..427 CDD:391944 95/439 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.