DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42284 and Nfkbie

DIOPT Version :10

Sequence 1:NP_611720.3 Gene:CG42284 / 37621 FlyBaseID:FBgn0259179 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_954542.1 Gene:Nfkbie / 316241 RGDID:735070 Length:365 Species:Rattus norvegicus


Alignment Length:397 Identity:95/397 - (23%)
Similarity:158/397 - (39%) Gaps:111/397 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 DSLADPLIKALTEIANKRPRDPVAYLTNYLQHF----------MGDRKPMTEVQV---HSGSSKA 347
            ||..|..|::|..:  :...||.|...:...|.          ..|::|..:...   .:.|:.|
  Rat    13 DSQCDSGIESLRSL--RSLPDPAAAPVSGSSHSGCPQPWSHAPKTDKEPEGKEDADGERADSTYA 75

  Fly   348 STSSTSTLALPKSNASSNQRLGNTRNGPGPTN----ADLI---ELDARS-VAEDEDAEGALAVQH 404
            |:|.|.:|.|.:...:.:.      |.|.|::    |.::   :|:|.: ::||.|....|||.|
  Rat    76 SSSLTESLPLLERPEAKDP------NPPTPSSPVSPAGVLSPQQLEALTYISEDGDTLLHLAVIH 134

  Fly   405 MEERDEHGQSMLHFACARSHRRGALYTLIEESGIDITYRDELYRTARDVSLQANQPNNAAEIDRY 469
                  ...|:| |.|         ...:.:..:||  ::.||:||..:::..:||         
  Rat   135 ------EAPSVL-FCC---------LAFLPQEVLDI--QNNLYQTALHLAVHLDQP--------- 172

  Fly   470 VMAQAVIGDVEPFEQLALQGYDHILDIEDENGQSITDVVQSRQNAALGEFLANLKALEESREELH 534
                    ||  ...|.|:|...||  :|::|.:...|...|||.|....|     |||..|...
  Rat   173 --------DV--VRALVLKGASRIL--QDQHGDTALHVACQRQNLACACCL-----LEEQPEPGR 220

  Fly   535 QMIRENNMERVVELTNVANAKWLIRTKNYYGRTALHIAVLKESEEMVQHMVKICPEGLKITDNLE 599
            |.....:::                .||:.|...||||.|:.::.:::.:::   .|..| |..|
  Rat   221 QPSHPLDLQ----------------LKNWQGLACLHIATLQRNQPLIELLLQ---NGADI-DAQE 265

  Fly   600 ----RTVLHYAMGTNALESVSRILIQNGAKRTAKDLKGRQPSYYFINK-------------ADIL 647
                :|.||.|:.|.. .|:.:.|:|.||:..|:.|.|..|.:....:             ||.|
  Rat   266 GTSGKTALHLAVETQE-RSLVQFLLQAGARVDARMLNGCTPLHLAAGRGLNSISSTLCEAGADSL 329

  Fly   648 RLQEEEE 654
            .|..|:|
  Rat   330 LLNVEDE 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42284NP_611720.3 Ank_2 135..231 CDD:463710
ANK repeat 165..197 CDD:293786
Dpy-30 289..330 CDD:428357 9/43 (21%)
Ank_2 533..630 CDD:463710 24/100 (24%)
ANK repeat 564..596 CDD:293786 8/31 (26%)
ANK repeat 598..630 CDD:293786 12/35 (34%)
NfkbieNP_954542.1 ANKYR 122..359 CDD:440430 71/280 (25%)
ANK repeat 123..156 CDD:293786 12/50 (24%)
ANK repeat 160..189 CDD:293786 11/49 (22%)
ANK repeat 191..232 CDD:293786 12/61 (20%)
ANK repeat 235..265 CDD:293786 9/33 (27%)
ANK repeat 268..299 CDD:293786 11/31 (35%)
ANK repeat 301..335 CDD:293786 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.

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