DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42284 and trp-4

DIOPT Version :9

Sequence 1:NP_611720.3 Gene:CG42284 / 37621 FlyBaseID:FBgn0259179 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_493429.2 Gene:trp-4 / 190574 WormBaseID:WBGene00006616 Length:1924 Species:Caenorhabditis elegans


Alignment Length:721 Identity:155/721 - (21%)
Similarity:284/721 - (39%) Gaps:180/721 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 DDGNESLTSAMA--------IEGFVHGAPEDYTVQSQTAVDENERIKRI-VESGDLEQLAEIVL- 100
            :||:.||...:|        :|..:.|..::   |::.|....:.:..: ..||::|.:...:. 
 Worm   453 EDGDGSLPIHLAFKFGNVNIVELLLSGPSDE---QTRKADGNGDTLLHLAARSGNIEAVRTAIAA 514

  Fly   101 ---NGEGGSLVGLKSPEPEI-QAFLNNVPSYMEKIHR------------VHDAARDGGLLALQQA 149
               |....:.|| ::|..|: :....|:...|.|:..            ||.||..|....::..
 Worm   515 GCDNANVQNRVG-RTPLHEVAEVGDQNMLKIMFKLRADANIHDKEDKTPVHVAAERGDTSMVESL 578

  Fly   150 LDRRKFAIAKNDISPNGSTPLHVAVLFGHT---------------------------------DI 181
            :|  ||..:....:.:|||.||:|...|||                                 |:
 Worm   579 ID--KFGGSIRARTRDGSTLLHIAACSGHTSTALAFLKRGVPLFMPNKKGALGLHSAAAAGFNDV 641

  Fly   182 VRYLASR-------------------------FPETMTITDND--------GRTPLHYAATIK-- 211
            |:.|.:|                         ..||:..:..|        |:|.||.||::.  
 Worm   642 VKMLIARGTNVDVRTRDNYTALHVAVQSGKASVVETLLGSGADIHVKGGELGQTALHIAASLNGA 706

  Fly   212 DNGHFYNMLLQLGANPKSLDKLGHSAEFYLDKEKAKNILNYTELLNIFGAEELENQLLNDQGQ-- 274
            ::.....|||:.|..|......|.:......:...|:|:..  ||:    |..::::.:..|:  
 Worm   707 ESRDCAMMLLKSGGQPDVAQMDGETCLHIAARSGNKDIMRL--LLD----ENADSKISSKIGETP 765

  Fly   275 ----AQPVSFQANPIFKTEQGKYLADSLADPLIKALTEIANKRPRD---PVAYLTNYLQ---HFM 329
                |:..:|:|..:..    |:|::.|....:|   |..|.|..|   .:.|.....|   ||.
 Worm   766 LQVAAKSCNFEAASMIL----KHLSEVLTQEQLK---EHVNHRTNDGFTALHYAAEIEQRQLHFP 823

  Fly   330 GDRKPMTEVQVHSGSSKASTSSTSTLALPKSNASSNQRLGNTRNGPGPTNADLIELDARSVAEDE 394
            |:...:..:.:..|         ..:.:|..||:........|:|   ..|.|:.:        .
 Worm   824 GEDAKLVNLLIDYG---------GMVEMPSLNANETAMHMAARSG---NQAVLLAM--------V 868

  Fly   395 DAEGALAVQHME-ERDEHGQSMLHFACARSHRRGALYTLIEESGIDITYRDELYRTARDVSL--- 455
            :..||.|||.:: ::.::|.|.|..||||.|...|...|...:.||:.  ||:.|||..::.   
 Worm   869 NKIGAGAVQIVQNKQSKNGWSPLLEACARGHSGVANILLKHHARIDVF--DEMGRTALHLAAFNG 931

  Fly   456 QANQPNNAAEIDRYVMAQAVIGDVEPFEQLALQGYDHILDI-EDENGQSITDVVQSRQNA----- 514
            ..:..:...:...:|.:::..|:. |....|..|:..:::: ..::|.::..:....|.|     
 Worm   932 HLSLVHLLLQHKAFVNSKSKTGEA-PLHLAAQHGHVKVVNVLVQDHGAALEAITLDNQTALHFAA 995

  Fly   515 -----ALGEFLANLKALEESREE-----LHQMIRENNMERVVEL----TNVANAKWLIRTKNYYG 565
                 |:.:.|..|.|...:|::     || :..||:...||:|    .|  |.:.::...::.|
 Worm   996 KFGQLAVSQTLLALGANPNARDDKGQTPLH-LAAENDFPDVVKLFLKMRN--NNRSVLTAIDHNG 1057

  Fly   566 RTALHIAVLKESEEMVQHMVKI-CPEGLKI-TDNLERTVLHY-AMGTNALESVSRILIQNGAKRT 627
            .|..|||.:|.|..:|:.::.| .|..::. |..||.|.||. |.|.:|  ::.:||::|||...
 Worm  1058 FTCAHIAAMKGSLAVVRELMMIDKPMVIQAKTKTLEATTLHMAAAGGHA--NIVKILLENGANAE 1120

  Fly   628 AKDLKG 633
            .::..|
 Worm  1121 DENSHG 1126

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG42284NP_611720.3 ANK 135..250 CDD:238125 36/182 (20%)
Ank_2 135..231 CDD:289560 34/163 (21%)
ANK repeat 165..197 CDD:293786 15/89 (17%)
Dpy-30 289..330 CDD:253069 12/46 (26%)
ANK 407..585 CDD:238125 47/200 (24%)
ANK 533..649 CDD:238125 34/108 (31%)
Ank_2 533..630 CDD:289560 33/103 (32%)
ANK repeat 564..596 CDD:293786 10/33 (30%)
ANK repeat 598..630 CDD:293786 13/32 (41%)
trp-4NP_493429.2 ANK repeat 804..842 CDD:293786 7/46 (15%)
ANK repeat 849..884 CDD:293786 9/45 (20%)
ANK repeat 886..917 CDD:293786 12/32 (38%)
ANK repeat 919..950 CDD:293786 4/30 (13%)
ANK repeat 952..982 CDD:293786 5/30 (17%)
ANK repeat 986..1017 CDD:293786 6/30 (20%)
PHA03095 1006..>1336 CDD:222980 38/126 (30%)
ANK repeat 1092..1123 CDD:293786 13/32 (41%)
ANK repeat 1204..1236 CDD:293786
trp 1209..1879 CDD:273311
ANK repeat 1238..1270 CDD:293786
ANK repeat 1272..1303 CDD:293786
ANK repeat 1305..1336 CDD:293786
ANK repeat 1338..1366 CDD:293786
ANKYR 280..515 CDD:223738 12/64 (19%)
ANK repeat 352..383 CDD:293786
ANK repeat 385..418 CDD:293786