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Protein Alignment CG42284 and arcp-1

DIOPT Version :9

Sequence 1:	NP_611720.3	Gene:	CG42284 / 37621	FlyBaseID:	FBgn0259179	Length:	657	Species:	Drosophila melanogaster
Sequence 2:	NP_001254879.1	Gene:	arcp-1 / 175486	WormBaseID:	WBGene00009375	Length:	1235	Species:	Caenorhabditis elegans

Alignment Length:	668	Identity:	166/668 - (24%)
Similarity:	286/668 - (42%)	Gaps:	99/668 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    24 SDSKGANPQE-GQQPGAGAQPPEDDGNESLTSAMAIEGFVHGAPEDYTVQSQTAVDE-------- 79
            :|..|...:| .|.||...:|     :.:::|.|              ::|.:..||
Worm   518 ADQDGITAEEYRQNPGRLLRP-----SSAVSSVM--------------LRSMSTDDEFFDPDAPS 563

  Fly    80 NERIKRIVESGDLEQLAEIVLNGEGGSLVGLKSPEPEIQAFLNNVPSYMEKIHRVHDAARDGGLL 144
            .|:::..:.:|::.:|.:|||:|.|..|...|:.......||:.:..|:.||..:|.|..:|.:.
Worm   564 EEQVEEWLATGEVLKLEQIVLDGRGHMLREKKTVNASSNEFLSGLTQYLTKIDAIHKAVEEGDVR 628

  Fly   145 ALQQALDRRKFAIAKNDISPNGSTPLHVAVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAAT 209
            .::..:||...:.|:::.   |.||:|.|:|.|.|:.||:|..|||..:..||:.|||||||||.
Worm   629 RVKSLIDRPLLSTARDNY---GMTPIHKALLHGQTNTVRFLLGRFPSCVNATDHAGRTPLHYAAA 690

  Fly   210 IKDNGHFYNMLLQLGANPKSLDKLGHSAEFYLDKEKAKNILNYTE--LLNIFGAEELENQLLNDQ 272
            ..:..|...:|.:.|.:....||.||:..:|....:..|:.:..:  ::|...:.:|...||.|.
Worm   691 DPNGEHMIKVLQKSGGDAFIEDKHGHTPFYYRTHGQRLNVRSMKDNAVMNQLISGQLSRPLLQDL 755

  Fly   273 GQAQPVSFQANPIFKTEQGKYLADSLADPLIKALTEIANKRPRDPVAYLTNYLQHFMGDRKPMTE 337
            .:..........|.|.|:  .:....||.|:....|:.:   .|.:.:|         :..|..:
Worm   756 EEDIYDWIHTGNIGKLEE--LVLTGYADLLLGRNHEVDD---ADSIGFL---------EVLPQYQ 806

  Fly   338 VQVHSGSSKASTSSTSTLALPKSNASSNQRLGNTRNGPGPTNADLIELDARSVAEDEDAEGALA- 401
            .::.|......|.:...:.|    .:..::|...|:..|     |..|....|.|..|....|.
Worm   807 AKIQSIHKAVETGNLRAVKL----LTDRKKLSLCRDTRG-----LSPLHKAIVFERTDIAKYLIR 862

  Fly   402 --VQHMEERDEHGQSMLHFACARSHRRGALYTLIEESGIDITYRDELYRTAR-------DVSLQA 457
              .|.:...|:..::.||:|.|... .|.||.::.:||.|....|...|.|:       ::.|.|
Worm   863 NYPQSVNAMDQKKRTPLHYAAALKD-GGYLYKVMRKSGADPNIYDCNGRPAKYYLKHTGEIDLSA 926

  Fly   458 NQPNNAAEIDRYV---MAQAVI----------GDVEPFEQLALQGYDHILDIEDENGQSITDVVQ 509
            .:.:..|.:.:.:   :|.:.:          |.:...|||.|.|              ..|::|
Worm   927 MRLDTRAALKQVLHNRVAPSYLESSIQQWLRDGQLAKLEQLVLSG--------------CGDLLQ 977

  Fly   510 SR--QNAALGEFLANLKALEESREELHQMIRENNMERVVELTNVANAKWLIRTKNYYGRTALHIA 572
            ||  .:.....||..|....:..:.:|:.|:|.|:::|.||   ...|.|...::.:|.|.||.|
Worm   978 SRTSTHTETQAFLDRLPDYMDKIDGIHKSIKEGNLDKVKEL---MKTKKLAIARDRFGCTPLHSA 1039

  Fly   573 VLKESEEMVQHMVKICPEGLKITDNLERTVLHYAMGTNALESVSRILIQNGAKRTAKDLKGRQPS 637
            |:.|..|:|:::.......|...|..:||.:|||..........:||.:.||...|.|.:||.|.
Worm  1040 VVHEHTEIVRYIAGHYNSVLNAPDYNKRTAMHYAAAARDGGHYLKILGKAGADPMAVDNEGRTPD 1104

  Fly   638 YYFINKADILRLQEEEEE 655
            ||..|....|:|.::.:|
Worm  1105 YYRRNAVIDLKLIKDRDE 1122

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.