DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamtsl1

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_006538438.1 Gene:Adamtsl1 / 77739 MGIID:1924989 Length:1999 Species:Mus musculus


Alignment Length:720 Identity:138/720 - (19%)
Similarity:203/720 - (28%) Gaps:320/720 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 MWC----RGGTCEARSSKQGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPL------------- 665
            :||    .|.:|.|: .:....:.|..|.....|..|.::..|.| |:.|.|             
Mouse   159 IWCLLCVAGQSCSAQ-QRDVHLAFLACWLSFPHPPTTTDRGSRVE-NQNPTLKEVCGDQSQGAVF 221

  Fly   666 -----------LHD------YNPMDNELPGSPS------------NWGEWSEPSACESGCLYGQS 701
                       ||:      .|....|.|.|.:            .||.|||   |...|..|.|
Mouse   222 LREFTLIRRESLHEEFLSDFLNSHKTEDPSSRTARSEEDREGLWDAWGPWSE---CSRTCGGGAS 283

  Fly   702 RRLLEGSTGLRTLNRSCLNFPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQARKSDPEL 766
            ..|           |.||:..| |.||:.|:.||:...|   |.:. .||..|.|  :..:|.:.
Mouse   284 YSL-----------RRCLSSKS-CEGRNIRYRTCSNVDC---PPEA-GDFRAQQC--SAHNDVKY 330

  Fly   767 TGE-GQQLPSTLDAS--CKIFCRTRTNGTKSRRWTFP---DGTTCKAKQHNPEDITYCISGRCER 825
            .|: .:.||.:.|..  |.:.|:.:  ||.......|   |||.|..     |.:..||||.|:.
Mouse   331 HGQLYEWLPVSNDPDNPCSLKCQAK--GTSLVVELAPKVLDGTRCYT-----ESLDMCISGLCQI 388

  Fly   826 FSCDNSTSNFFKMDS--------SFC--------------------------------------- 843
            ..||:...:..|.|:        |.|                                       
Mouse   389 VGCDHQLGSTVKEDNCGVCNGDGSTCRLVRGQYKSQLSASKSDDTVVAIPYGSRHIRLVLKGPDH 453

  Fly   844 ---EARSVRPTR-------------DSS--------DQE-------------------------- 858
               |.::::.|:             |:|        |:|                          
Mouse   454 LYLETKTLQGTKGENSLSSTGIFLVDNSTVDFQKLPDKEILRMTGPLTADFIIKIHDLGPADSTV 518

  Fly   859 --------------------------SRQQTNRQRY---AERQEGKPQKNHYENEVAKRPSYGQG 894
                                      ..|.|:.:.|   :.|.......::|...|..:|...:.
Mouse   519 QFIFYQPIIHRWRETDFFPCSATCGGGYQLTSAECYDLRSNRVVADQYCHYYPENVKPKPKLQEC 583

  Fly   895 NHINAPASPYKRRNYHKPYPPEIPRPPPPASASLIALDRSSSSESEWVAHP--GCHSNCMTDSKG 957
            |....|||.    .|.:..|.::..|.|                 .|.|.|  .|.|:|   ..|
Mouse   584 NLDPCPASD----GYKQIMPYDLYHPLP-----------------RWEATPWTACSSSC---GGG 624

  Fly   958 VQG---------VTSRLTGVESIQLCSYR-----IQPCERLQTAAEYAEQ------TCA---RYR 999
            :|.         :...:|.||..: |.|.     :|||.........|::      ||.   |||
Mouse   625 IQSRAVSCVEEDIQGHVTSVEEWK-CMYTPKMPVVQPCNIFDCPKWLAQEWSPCTVTCGQGLRYR 688

  Fly  1000 QKV----RGLSGHGAQ-------------------------ISASI----------------DEP 1019
            ..:    ||:...|..                         |.|.:                :||
Mouse   689 VVLCIDHRGMHTGGCSAKTKPHIKEECIIPTPCYKPREKLPIEAKLPWFKQAQELEEGAAVSEEP 753

  Fly  1020 D----------RSCRVGCQDEFIKYRYYLVNGRNGHFPPGTRC---SPVGKRYCVYGRC----LE 1067
            .          .:|.||.|...|:.:..|...::....|...|   .|..:|.|..|.|    .|
Mouse   754 SFIPEAWSACTVTCGVGTQVRIIRCQVLLPFSQSVADLPADECEGPKPASQRACYAGPCNGETPE 818

  Fly  1068 FGDDD 1072
            |..|:
Mouse   819 FNPDN 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801
Reprolysin 332..545 CDD:279729
TSP1 683..741 CDD:214559 20/57 (35%)
Adamtsl1XP_006538438.1 TSP1 265..311 CDD:214559 21/63 (33%)
TSP1 609..667 CDD:214559 16/61 (26%)
PTZ00441 <663..>735 CDD:240420 11/71 (15%)
TSP_1 760..812 CDD:387593 12/51 (24%)
TSP1 899..958 CDD:214559
TSP1 1019..1078 CDD:214559
IGc2 1120..1178 CDD:197706
Ig 1427..1492 CDD:319273
Ig 1533..1604 CDD:319273
IGc2 1647..1713 CDD:197706
TSP1 1789..1844 CDD:214559
PLAC 1967..1996 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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