DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and adamts6

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_017213499.1 Gene:adamts6 / 569099 ZFINID:ZDB-GENE-091113-9 Length:1116 Species:Danio rerio


Alignment Length:1028 Identity:238/1028 - (23%)
Similarity:362/1028 - (35%) Gaps:317/1028 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 RPGEAEQHGGNPHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEAR-------------LQLQQS 161
            |||            |:||.|              :|...:..|.|             |.|..:
Zfish    62 RPG------------RRRRGL--------------DQTELDHTETRLFYKLSAYGKHFHLNLTLN 100

  Fly   162 PQLIDDAFIFIRRTENGTQFVEHSPQLLKRLERCF--------YRSPAAALDLCEPGNVRGVFQQ 218
            |.|:...|......::|..: :||.     ::.|.        |.:...||..|:  .:.||...
Zfish   101 PNLVSKHFTVEYWGKDGLDW-QHSV-----VDNCHYVGYLLDQYSTTKVALSNCK--GLHGVITT 157

  Fly   219 NGSDLVIHPL--------PARFGTGTHVLY--------QARVDKSGGGYSEASSRRTASPLDSQL 267
            .....:|.||        ........||:|        |....:...|.|:.:..||        
Zfish   158 EDEQYLIEPLKNISRNFSDVNHEGQPHVIYKKTSIPSPQEPSKEFSCGVSDLTVNRT-------- 214

  Fly   268 QFEPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSDIPEELF 332
            ||.....:.|.....|...|.:.:                |:|||             .:..|.|
Zfish   215 QFYNTNPKLNPDFPVLGVDSLMGA----------------HRQRR-------------SVSSERF 250

  Fly   333 IETAIFVDSDLYA-HMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSW 396
            :||.:..|..:.. |.:|:        :..::|:::|.|..||...:||..:|.::.|| |..:.
Zfish   251 VETLVVADKMMVGYHGRKD--------IEHYILSVMNIVAKLYRDASLGNVVNIIVTRL-IVLTE 306

  Fly   397 DPPGLVRSRDVENYLNSFCKWQEKL-------NPFSDADPLHYDHALVLTGLDLVTYDKGKANSQ 454
            |.|.|..:...:..|:||||||:.:       |...:....|:|:|:::|..|:.||......: 
Zfish   307 DQPNLEINHHADKSLDSFCKWQKSILSHQGDGNSIPENGIAHHDNAVLITRYDICTYKNKPCGT- 370

  Fly   455 VVGMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTMHIMSPKLGSGK 519
             :|:|:|.|||....||:|||.....|.|.:|||||||.||.||....||....| .:.||.:..
Zfish   371 -LGLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGH-ETAKLMAAH 433

  Fly   520 VT-------WSKCSRTYLEDFLMDPQAECL----FDRDSFAGPWDHTAGGRLPGERFNANQQCML 573
            :|       ||.||:.|:..||...:..||    ..|| |..|   |..   ||:.::|::||..
Zfish   434 ITANTNPFSWSACSKDYITSFLDSGRGTCLDNEPLKRD-FLYP---TVA---PGQVYDADEQCRF 491

  Fly   574 RFGKNFMQASTQSKM-EICRDLHC--RQDGLPWTSHPALEGTECGPNM----WCRGGTCEARSSK 631
            ::|    .:|.|.|. |:||:|.|  :.:.....|.||.|||.|..|.    ||..|.|      
Zfish   492 QYG----ASSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTNTIEKGWCYQGEC------ 546

  Fly   632 QGSYSALKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGC 696
                .|..:||                               ..:.||   ||.|:         
Zfish   547 ----VAFGTWP-------------------------------QSVDGS---WGPWT--------- 564

  Fly   697 LYGQSRRLLEGSTGLRTLNRSCLN-FPS----RCIGRDRRFVTCNTPQCHKVPVQTINDFATQVC 756
            ::|:..|...|  |:.:..|.|.: .||    .|:|..:|:.:|||..|    .:...||..:.|
Zfish   565 VWGECSRTCGG--GVSSSMRHCDSPAPSGGGKYCLGERKRYRSCNTDAC----PEGSRDFREKQC 623

  Fly   757 MQARKSDP---------ELTGEGQQLPSTLDASCKIFCRTR-TNGTKSRRWTFPDGTTCKAKQHN 811
            ... .|.|         ..||.|.:       .|.:.|... .|....|.....|||.|:.    
Zfish   624 ADF-DSLPFRGKYYNWKPYTGGGVK-------PCALNCLAEGYNFYTERSPAVIDGTRCQG---- 676

  Fly   812 PEDITYCISGRCERFSCDNSTSNFFKM--------DSSFCEARSVRPTRDSSDQESRQQTNRQRY 868
             :.:..||:|.|:...|||...:..|.        |.|.||.         ::........|..|
Zfish   677 -DSLDICINGECKHVGCDNILGSDAKEDRCRVCGGDGSTCEL---------TEGLFNDSLPRGGY 731

  Fly   869 AERQEGKPQKNHYE-NEVAKRPSY------GQGNHIN-APASPYKRR------NYHKPYPPEIPR 919
            .|..:......|.| .|||...:|      |...:|| |....:.|:      .:|...|.:.|.
Zfish   732 MEVVQIPKGSVHIEIREVAVSKNYIALKSEGDDYYINGAWTIDWPRKFDIAGTAFHYKRPTDEPE 796

  Fly   920 PPPPASASL---------------------IALDRSSSSESE----WVAHP--GCHSNCMTDSKG 957
            ......|::                     :.:.|:.|.::|    |...|  .|.:.|...|:.
Zfish   797 SLEALGATMENLVVMVLLQEQNLGIQYKFNVPIQRTGSGDNEVGFSWHHLPWSECSATCAGGSQK 861

  Fly   958 VQGVTSRLTGVESIQ--LCSY-----------RIQPCERLQTAAEYAE--QTC 995
            .:.|..||.....:|  .|..           ..:||.......:::|  :||
Zfish   862 QEVVCKRLDDNSVVQNSYCDQDSKPPGNQRRCNTEPCPPEWFIGDWSECGKTC 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 74/230 (32%)
ADAMTS_CR_2 561..625 CDD:465496 25/70 (36%)
TSP1 683..741 CDD:214559 17/62 (27%)
adamts6XP_017213499.1 Pep_M12B_propep 40..187 CDD:460254 30/158 (19%)
ZnMc_ADAMTS_like 249..464 CDD:239801 73/226 (32%)
ADAMTS_CR_2 479..547 CDD:465496 26/81 (32%)
TSP1 560..612 CDD:214559 18/66 (27%)
ADAMTS_CR_3 617..715 CDD:437068 26/110 (24%)
ADAMTS_spacer1 719..828 CDD:461796 18/108 (17%)
TSP1_ADAMTS 843..898 CDD:465950 10/54 (19%)
TSP1_ADAMTS 902..958 CDD:465950 3/13 (23%)
TSP1_ADAMTS 962..1016 CDD:465950
TSP1_ADAMTS 1021..1070 CDD:465950
PLAC 1082..1114 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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