DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and paplnb

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001018400.1 Gene:paplnb / 553586 ZFINID:ZDB-GENE-030131-6023 Length:548 Species:Danio rerio


Alignment Length:607 Identity:116/607 - (19%)
Similarity:183/607 - (30%) Gaps:215/607 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 SRTYLEDFLMDPQAECL-FDRDSFAG---PWDHTAGGRLPGERFNANQQCMLRFGKNFMQASTQS 586
            ||.:.|:       :|. ||:.:|.|   .|....|...|.|..     |:.| |:||.      
Zfish    81 SRDFREE-------QCSHFDQMTFQGKRYTWQPYYGASNPCELV-----CVPR-GENFY------ 126

  Fly   587 KMEICRDLHCRQDGLPWTSHPA-LEGTEC--GPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPE 648
                            :...|| ::||.|  |....|..|.|.|                     
Zfish   127 ----------------YRHRPAVVDGTLCHVGRRDVCVEGVCRA--------------------- 154

  Fly   649 ATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLEGSTGLRT 713
            .:|.:|:..|...||       ......||:..:...:....:..|.|     .||..|....||
Zfish   155 VSHGEIVGFEDRDIP-------VTSRHGPGAAVHLDTYRYTYSAYSEC-----SRLCGGGVQSRT 207

  Fly   714 L-----NRSCLNFPSRCIGRDRR----FVTCNTPQCHKVPVQTINDFATQVCMQARKSDPELTGE 769
            :     ..|.:...|.||.:..|    .|.||...|.:.......|                   
Zfish   208 VYCVHERTSAMVDESHCIAKGLRKPTAQVACNEHACAEYSAGPFGD------------------- 253

  Fly   770 GQQLPSTLDASCKIFCRTRTNGTKSRRWTFPDGTTCKAKQHN------PEDITYCISGRCERFSC 828
                       |.:.|   ..|.::|......|...:..:|:      |:|     :..|:|.:|
Zfish   254 -----------CSVTC---GEGLQTREVICVGGRGERLSEHHCSGLTRPQD-----TKACKRPAC 299

  Fly   829 DNSTSNFFKMDSSFCEARSVRPTRD------SSDQ-----ESRQQTNRQRYAERQEGKP------ 876
             :....::..|.|.|.......||:      ..||     :.....:|....|....:|      
Zfish   300 -HQVFRYYTNDFSLCTRSCGTGTRERRVVCMDLDQHPYSDDRCASLSRPHAVENCNTQPCPGPQT 363

  Fly   877 -----QKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPPEIPRPPPPASASLIALD---R 933
                 ..|.||:.:....||     .::|.|.|:..:   || |.:..|....|......|   .
Zfish   364 VPSVQNPNGYESSLRGFLSY-----THSPVSVYRPSD---PY-PTVTGPHCAQSHYGCCPDGHTT 419

  Fly   934 SSSSESEWVAHPGCHSN---CMTDSKGVQGVTS----RLTGV---------ESIQLCSYR--IQP 980
            :|....|..||..|..:   |..|     |:|:    |..|.         .|..:||..  :.|
Zfish   420 ASGPRGEGCAHDDCQRSRYGCCLD-----GITAALGYRRAGCPDSSYGDHSPSASVCSLARDVGP 479

  Fly   981 CERLQTA--AEYAEQTCARYRQKVRGLSGHGAQISASIDEPDRSCRVGCQDEFIKYRYYLVNGRN 1043
            |...::.  .:::..:|:::  ...|..|:|....:.: ..:|:|:..            |.|| 
Zfish   480 CYEYKSRFYFDHSSGSCSQF--WFGGCQGNGNNFVSKV-ACERTCKAS------------VRGR- 528

  Fly  1044 GHFPPGTRCSPVGKR--YCVYG 1063
                     .|..:|  |.|.|
Zfish   529 ---------EPTSRRVIYDVRG 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801 4/17 (24%)
Reprolysin 332..545 CDD:279729 5/19 (26%)
TSP1 683..741 CDD:214559 15/66 (23%)
paplnbNP_001018400.1 TSP1 28..78 CDD:214559
TSP1 249..300 CDD:214559 12/89 (13%)
TSP1 309..359 CDD:214559 10/49 (20%)
Kunitz_BPTI 470..522 CDD:278443 9/54 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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