DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and ADAMTSL4

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_011507946.1 Gene:ADAMTSL4 / 54507 HGNCID:19706 Length:1130 Species:Homo sapiens


Alignment Length:592 Identity:119/592 - (20%)
Similarity:171/592 - (28%) Gaps:193/592 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   591 CRDLHCRQD--GLPWTSHPALEGTECGPNMWCRGGTCEARSSKQGSYSALKSWPPEHIPEATHEK 653
            |....|.|.  ..||.|               |||..|..:.:...|..|..    .:|:...::
Human    13 CLRSFCDQSAPASPWGS---------------RGGAMENWTGRPWLYLLLLL----SLPQLCLDQ 58

  Fly   654 IIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRR--------------- 703
            .:...        |.......|..|....||.|.:.::|...|..|..||               
Human    59 EVLSG--------HSLQTPTEEGQGPEGVWGPWVQWASCSQPCGVGVQRRSRTCQLPTVQLHPSL 115

  Fly   704 ------------LLEGSTG------------LRTLNR---SCLNFPSRCIGRDRRFVTCNTPQCH 741
                        ||....|            .||.:|   ..|..|:..:||:.           
Human   116 PLPPRPPRHPEALLPRGQGPRPQTSPETLPLYRTQSRGRGGPLRGPASHLGREE----------- 169

  Fly   742 KVPVQTINDFATQVCMQARKS------DPELTGEGQQLPSTLDASCKIFCRTRTNGTKSRRWTFP 800
                       ||....||:|      .|.:.|.| ::|..|...     |.|      |....|
Human   170 -----------TQEIRAARRSRLRDPIKPGMFGYG-RVPFALPLH-----RNR------RHPRSP 211

  Fly   801 DGTTCKAKQHNPEDITYCISGRCERFSCDNSTSNFFKMDSSFCEARSVRPTRDSSDQESRQ---- 861
            ..:.........|:.....:.|.|.||.:.|...            .:.||..|....|.|    
Human   212 PRSELSLISSRGEEAIPSPTPRAEPFSANGSPQT------------ELPPTELSVHTPSPQAEPL 264

  Fly   862 --QTNRQRYAERQEGKPQKNHYENEVA--KRP----SYGQGNHINAPASPYKRRNYHKPY-PPEI 917
              :|.:...|.|....|.::|...:.:  :.|    |.|:|....  |||..||...:.: .|::
Human   265 SPETAQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHSLGEGGFFR--ASPQPRRPSSQGWASPQV 327

  Fly   918 P--RPPPPASASLIALDRSSSSESEW--------------VAHPGC---------HSNCMTDSKG 957
            .  ||.|..|   :...|....:..|              ..|||.         |::.:.....
Human   328 AGRRPDPFPS---VPRGRGQQGQGPWGTGGTPHGPRLEPDPQHPGAWLPLLSNGPHASSLWSLFA 389

  Fly   958 VQGVTSRLTGVESIQLCSYRIQPC-------ERLQTAA--------------EYAEQTCARYRQK 1001
            ......|.:| ||.||.:....||       ..||.||              .:.|......|..
Human   390 PSSPIPRCSG-ESEQLRACSQAPCPPEQPDPRALQCAAFNSQEFMGQLYQWEPFTEAPLLPLRHA 453

  Fly  1002 VRGLSGHGAQISASIDEPDRSCRVGCQDEFIKYRYYLVNGRNGHFPPGTRCSPVGKRYCVYGRCL 1066
            ...|.|.|:..|..:....| |.:.|:..  .:|:|:.:...  ...||.|.|.....||.||||
Human   454 FFLLPGAGSGDSTGVQGSQR-CELNCRPR--GFRFYVRHTEK--VQDGTLCQPGAPDICVAGRCL 513

  Fly  1067 EFGDDDL 1073
            ..|.|.:
Human   514 SPGCDGI 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801
Reprolysin 332..545 CDD:279729
TSP1 683..741 CDD:214559 18/99 (18%)
ADAMTSL4XP_011507946.1 TSP1 80..>110 CDD:214559 8/29 (28%)
ADAM_spacer1 541..655 CDD:283607
TSP1 783..839 CDD:214559
TSP1 842..897 CDD:214559
TSP1 1033..1082 CDD:214559
PLAC 1089..1118 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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