DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamts6

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001102014.2 Gene:Adamts6 / 361886 RGDID:1307678 Length:1117 Species:Rattus norvegicus


Alignment Length:1130 Identity:262/1130 - (23%)
Similarity:399/1130 - (35%) Gaps:334/1130 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PGEAEQHGG-------NPHQRRQRRSLPSEDGNGPLPPEEEEQEAGEDVEA-----RLQLQQSPQ 163
            |...:|:|.       |....|:|||:..      |.|::...:....:.|     .|.|..:..
  Rat    47 PIRVDQNGAFLSFTVKNDKHSRRRRSMDL------LDPQQAVSKLFFKLSAYGKHFHLNLTLNTN 105

  Fly   164 LIDDAFIFIRRTENGTQFVEHSPQLLKRLERCFY--------RSPAAALDLCEPGNVRGVFQQNG 220
            .:...|......::|.|: :|.     .|:.|.|        .:...||..|.  .:.|:.....
  Rat   106 FVSKHFTVEYWGKDGPQW-KHD-----FLDNCHYTGYLQDQHSTTKVALSNCV--GLHGIIATED 162

  Fly   221 SDLVIHPLP--------ARFGTG-THVLYQARV-------DKSGGGYSEASSRRTASPLDSQLQF 269
            .:..|.||.        ..:..| .||:|:...       |.|..|.|:.:.......|:....|
  Rat   163 EEYFIEPLKNTTEDSKHFSYENGHPHVIYKKSTLQQRHIYDHSHCGVSDLTGSGKPWWLNKTSSF 227

  Fly   270 EPDAEEFNEPRRRLRAQSQLQSPLRLRFQPRHHHPHQHHQQRRRRYIGDAPRSRWSDIPEELFIE 334
             |.....|:                         .|.||:|||             .:..|.|:|
  Rat   228 -PSLPPIND-------------------------THNHHRQRR-------------SVSTERFVE 253

  Fly   335 TAIFVDSDLYA-HMQKNFPTNTESKVVSFLLAMINGVQLLYHHPTLGRRINFVLKRLEIWKSWDP 398
            |.:..|..:.. |.:|:        :..::|:::|.|..||...:||..:|.::.|| |..:.|.
  Rat   254 TLVVADKMMVGYHGRKD--------IEHYILSVMNIVAKLYRDSSLGNVVNIIVARL-IVLTEDQ 309

  Fly   399 PGLVRSRDVENYLNSFCKWQEK-LNPFSDADPL------HYDHALVLTGLDLVTYDKGKANSQVV 456
            |.|..:...:..|:||||||:. |:..||.:.:      |:|:|:::|..|:.||......:  :
  Rat   310 PNLEINHHADKSLDSFCKWQKSILSHQSDGNTIPENGIAHHDNAVLITRYDICTYKNKPCGT--L 372

  Fly   457 GMATVKGMCTSIYSCTINEAKHFESVFVVAHEIGHNLGMRHDAKEISCDPTMHIMSPKLGSGKVT 521
            |:|:|.|||....||:|||.....|.|.:|||||||.||.||....||....| .:.||.:..:|
  Rat   373 GLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGH-EAAKLMAAHIT 436

  Fly   522 -------WSKCSRTYLEDFLMDPQAECLFDRDSFAGPWDHTAGGRLPGERFNANQQCMLRFGKNF 579
                   ||.|||.|:..||...:..||   |:.....|.......||:.::|::||..::|   
  Rat   437 ANTNPFSWSACSRDYITSFLDSGRGTCL---DNEPPKRDFLYPAVAPGQVYDADEQCRFQYG--- 495

  Fly   580 MQASTQSKM-EICRDLHC--RQDGLPWTSHPALEGTECGPNM----WCRGGTCEARSSKQGSYSA 637
             ..|.|.|. |:||:|.|  :.:.....|.||.|||.|....    ||..|.|          ..
  Rat   496 -ATSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGNIEKGWCYQGDC----------VP 549

  Fly   638 LKSWPPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSR 702
            ..:||                               ..:.|   .||.||         |:|:..
  Rat   550 FGTWP-------------------------------QSIDG---GWGSWS---------LWGECS 571

  Fly   703 RLLEGSTGLRTLNRSCLN-FPS----RCIGRDRRFVTCNTPQCHKVPVQTINDFATQVC-----M 757
            |...|  |:.:..|.|.: .||    .|:|..:|:.:|||..|   |:.: .||..:.|     |
  Rat   572 RTCGG--GVSSSLRHCDSPAPSGGGKYCLGERKRYRSCNTDPC---PLGS-RDFREKQCADFDSM 630

  Fly   758 QARKSD---PELTGEGQQLPSTLDASCKIFCRTR-TNGTKSRRWTFPDGTTCKAKQHNPEDITYC 818
            ..|...   ...||.|.:       .|.:.|... .|....|.....|||.|     |.:.:..|
  Rat   631 PFRGKHYNWKPYTGGGVK-------PCALNCLAEGYNFYTERAPAVIDGTQC-----NADSLDIC 683

  Fly   819 ISGRCERFSCDNSTSNFFKM--------DSSFCEA---------------RSVRPTRDSSDQESR 860
            |:|.|:...|||...:..:.        |.|.|:|               ..|:..|.|...|.|
  Rat   684 INGECKHVGCDNILGSDAREDRCRVCGGDGSTCDAIEGFFNDSLPRGGYLEVVQIPRGSVHIEVR 748

  Fly   861 QQTNRQRY-AERQEGKPQKNHYENEVAKRPSYGQGNHINAPASPYKRRNYHKPYPPEIPRPPPPA 924
            :.:..:.| |.:.||   .::|.|. |....:.:...::..|..|||....    ||......|.
  Rat   749 EVSMSKNYIALKSEG---DDYYING-AWTIDWPRKFDVSGTAFHYKRPTDE----PESLEALGPT 805

  Fly   925 SASLIA------------------LDRSSSSESE----WVAHP--GCHSNCMTDSKGVQGVTSRL 965
            |.:||.                  :.|:.|.::|    |...|  .|.:.|....:..:.|..||
  Rat   806 SENLIVMVLLQEQNLGIRYKFNVPIVRTGSGDNEVGFMWTHQPWAECSATCAGGVQKQEVVCKRL 870

  Fly   966 TGVESIQ---------------LCSYRIQPCERLQTAAEYAE--QTC---ARYR-----QKVRGL 1005
            .....:|               .||  .:||.......::.|  :||   .|.|     :||   
  Rat   871 DDNSIVQNNFCDPDSKPPENQRACS--TEPCPPEWFIGDWLECSKTCDGGMRTRAVLCIRKV--- 930

  Fly  1006 SGHGAQISASIDEPD---------RSC-RVGCQDEFI---------------KYRYYLVNGRN-G 1044
               |.....::|..|         .|| ...|..:::               |:|..|....: .
  Rat   931 ---GPSEEETLDYSDCLTHRPVEKESCNNQSCPPQWVALDWSECTPKCGSGFKHRIVLCKSSDLS 992

  Fly  1045 HFPPGTRC----SPVGKRYCVYGRC 1065
            ...|..:|    .|..:..|..|||
  Rat   993 KTFPAAQCPEESKPPARIRCSLGRC 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801 76/226 (34%)
ADAMTS_CR_2 561..625 CDD:465496 24/70 (34%)
TSP1 683..741 CDD:214559 19/62 (31%)
Adamts6NP_001102014.2 Pep_M12B_propep 43..191 CDD:460254 30/157 (19%)
ZnMc_ADAMTS_like 250..465 CDD:239801 77/229 (34%)
ADAMTS_CR_2 480..548 CDD:465496 25/81 (31%)
TSP1 561..613 CDD:214559 20/65 (31%)
ADAMTS_CR_3 618..716 CDD:437068 26/109 (24%)
ADAMTS_spacer1 719..829 CDD:461796 22/117 (19%)
TSP1_ADAMTS 844..899 CDD:465950 10/56 (18%)
TSP1_ADAMTS 903..959 CDD:465950 12/61 (20%)
TSP1_ADAMTS 963..1017 CDD:465950 8/53 (15%)
TSP1_ADAMTS 1022..1071 CDD:465950
PLAC 1083..1115 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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