DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stl and ADAMTSL5

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_011526263.1 Gene:ADAMTSL5 / 339366 HGNCID:27912 Length:485 Species:Homo sapiens


Alignment Length:182 Identity:54/182 - (29%)
Similarity:74/182 - (40%) Gaps:42/182 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   941 WVAHPGCHSNCMTDSKGVQGVTS----RLTGVESIQLCSYRIQPCERLQT---AAEYAEQTCARY 998
            ||:...|.|:|   .:|| .|.|    ||.|.|.....|:..:.|:....   |..:.:..||.|
Human    51 WVSWTRCSSSC---GRGV-SVRSRRCLRLPGEEPCWGDSHEYRLCQLPDCPPGAVPFRDLQCALY 111

  Fly   999 R-------QKV-RGLSGHGAQISASIDEPDRSCRVGCQDEFIKYRYYLVNGRNGHFPPGTRCSPV 1055
            .       ||. :.:..|||        |:: |.:.|..|  .:.:|...||   ...||.|||.
Human   112 NGRPVLGTQKTYQWVPFHGA--------PNQ-CDLNCLAE--GHAFYHSFGR---VLDGTACSPG 162

  Fly  1056 GKRYCVYGRCLEFGDDDLPLDKTHISLGQLRTRRKRSSISND--LFNITEIF 1105
            .:..||.||||..|.|.|      :..|.|..|..|...:||  || :..:|
Human   163 AQGVCVAGRCLSAGCDGL------LGSGALEDRCGRCGGANDSCLF-VQRVF 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801
ADAMTS_CR_2 561..625 CDD:465496
TSP1 683..741 CDD:214559
ADAMTSL5XP_011526263.1 TSP1 48..97 CDD:214559 15/49 (31%)
ADAMTS_CR_3 103..200 CDD:437068 35/116 (30%)
ADAMTS_spacer1 215..315 CDD:461796
NTR_like 379..480 CDD:239600
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.