DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamtsl2

DIOPT Version :9

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:XP_038962070.1 Gene:Adamtsl2 / 311827 RGDID:1305459 Length:957 Species:Rattus norvegicus


Alignment Length:207 Identity:53/207 - (25%)
Similarity:74/207 - (35%) Gaps:55/207 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 DYNPMDNELPGSPSN----WGEWSEPSACESGCLYG---------QSRRLLEGSTGLRTLNRSCL 719
            |.:|..|.|.|....    ||||::.:||...|..|         |.||......|.||      
  Rat    31 DNSPTSNSLEGGADATAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGAGNRT------ 89

  Fly   720 NFPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCM---------QARKSDPELTGEGQQLPS 775
                 |:|..:|:..|...:|   |... ..|..:.|:         :|.:..|....:...:.|
  Rat    90 -----CVGTSKRYQLCRVQEC---PPDG-RSFREEQCVSFNSRVYDGRAYQWKPLYPDDYMHISS 145

  Fly   776 TLDASCKIFCRTRTNGTKSRRWTFPDGTTCKAKQHNPEDIT-YCISGRCERFSCDN---STSNFF 836
               ..|.:.| |..:|.:.......|||:||.     .|:. .|:||:||...||.   ||....
  Rat   146 ---KPCDLHC-TTVDGQRQLMVPARDGTSCKL-----TDLRGVCVSGKCEPIGCDGVLFSTHTLD 201

  Fly   837 KM-----DSSFC 843
            |.     |.|.|
  Rat   202 KCGVCQGDGSSC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 Pep_M12B_propep <155..239 CDD:279848
ZnMc_ADAMTS_like 331..543 CDD:239801
Reprolysin 332..545 CDD:279729
TSP1 683..741 CDD:214559 18/66 (27%)
Adamtsl2XP_038962070.1 TSP1 50..106 CDD:214559 19/69 (28%)
ADAM_spacer1 216..330 CDD:368694
TSP1_ADAMTS 632..691 CDD:408800
TSP1_ADAMTS 695..743 CDD:408800
TSP1_ADAMTS 747..800 CDD:408800
TSP1_ADAMTS 804..860 CDD:408800
TSP1_ADAMTS 863..913 CDD:408800
PLAC 922..953 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13723
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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