DRSC/TRiP Functional Genomics Resources

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Protein Alignment stl and Adamtsl2

DIOPT Version :10

Sequence 1:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001414019.1 Gene:Adamtsl2 / 311827 RGDID:1305459 Length:957 Species:Rattus norvegicus


Alignment Length:207 Identity:53/207 - (25%)
Similarity:74/207 - (35%) Gaps:55/207 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 DYNPMDNELPGSPSN----WGEWSEPSACESGCLYG---------QSRRLLEGSTGLRTLNRSCL 719
            |.:|..|.|.|....    ||||::.:||...|..|         |.||......|.||      
  Rat    31 DNSPTSNSLEGGADATAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGAGNRT------ 89

  Fly   720 NFPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCM---------QARKSDPELTGEGQQLPS 775
                 |:|..:|:..|...:|   |... ..|..:.|:         :|.:..|....:...:.|
  Rat    90 -----CVGTSKRYQLCRVQEC---PPDG-RSFREEQCVSFNSRVYDGRAYQWKPLYPDDYMHISS 145

  Fly   776 TLDASCKIFCRTRTNGTKSRRWTFPDGTTCKAKQHNPEDIT-YCISGRCERFSCDN---STSNFF 836
               ..|.:.| |..:|.:.......|||:||.     .|:. .|:||:||...||.   ||....
  Rat   146 ---KPCDLHC-TTVDGQRQLMVPARDGTSCKL-----TDLRGVCVSGKCEPIGCDGVLFSTHTLD 201

  Fly   837 KM-----DSSFC 843
            |.     |.|.|
  Rat   202 KCGVCQGDGSSC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801
ADAMTS_CR_2 561..625 CDD:465496
TSP1 683..741 CDD:214559 18/66 (27%)
Adamtsl2NP_001414019.1 None
Blue background indicates that the domain is not in the aligned region.

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